RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 IL1RNP18510 177 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 ITGAXP20702 1163 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 FOLR3P41439 243 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 CASP2P42575 452 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 SLC18A2Q05940 514 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 ZNF844Q08AG5 666 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 CDC20Q12834 499 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 TOR1AIP1Q5JTV8 583 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 ATP1A1-AS1Q5TC04 95 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 ABHD13Q7L211 337 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 TRABD2AQ86V40 505 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 NT5CQ8TCD5 201 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 WDR34Q96EX3 536 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 FAM117AQ9C073 453 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 SEMA4BQ9NPR2 832 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-202ENST00000421712 SLC22A11Q9NSA0 550 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 TRPC4Q9UBN4 977 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 ZNF282Q9UDV7 671 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-202ENST00000421712 ZNF490Q9ULM2 529 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-202ENST00000421712 CCDC88CQ9P219 2028 aa14.97□□□□□ -0.01
BRAT1-202ENST00000421712 FER1L5A0AVI2 2057 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 SGK494L7N484 410 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 FFAR3O14843 346 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 GPR42O15529 346 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 FOXS1O43638 330 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 SPAG7O75391 227 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 WFS1O76024 890 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 ALBP02768 609 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 SERPINA6P08185 405 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 ZNF888P0CJ79 500 aaPredicted RBP14.96□□□□□ -0.01
BRAT1-202ENST00000421712 CD22P20273 847 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 GSTM2P28161 218 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 OTX2P32243 289 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 CDH13P55290 713 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 RAB8AP61006 207 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 STXBP1P61764 594 aaKnown RBP14.96□□□□□ -0.01
BRAT1-202ENST00000421712 HERVK_113P63132 956 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 SKP1P63208 163 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 DDX39BQ13838 428 aaKnown RBP14.96□□□□□ -0.01
BRAT1-202ENST00000421712 HERC3Q15034 1050 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 DEFB109BQ30KR1 87 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 LIPJQ5W064 366 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 GRHL2Q6ISB3 625 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 MRPL14Q6P1L8 145 aaKnown RBP14.96□□□□□ -0.01
BRAT1-202ENST00000421712 SHISA6Q6ZSJ9 500 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 RPS27LQ71UM5 84 aaKnown RBP14.96□□□□□ -0.01
BRAT1-202ENST00000421712 COX15Q7KZN9 410 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 PRSS41Q7RTY9 318 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 CROCCP2Q86T23 111 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 PRSS58Q8IYP2 241 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 IQCKQ8N0W5 287 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 CREB3L4Q8TEY5 395 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 FKBP10Q96AY3 582 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 MIEF2Q96C03 454 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 CCDC126Q96EE4 140 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 NSUN5Q96P11 429 aaKnown RBP14.96□□□□□ -0.01
BRAT1-202ENST00000421712 ERVK-6Q9BXR3 956 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 C12orf65Q9H3J6 166 aaKnown RBP14.96□□□□□ -0.01
BRAT1-202ENST00000421712 SOX17Q9H6I2 414 aaPredicted RBP14.96□□□□□ -0.01
BRAT1-202ENST00000421712 ACSS2Q9NR19 701 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 CTSFQ9UBX1 484 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 PCTPQ9UKL6 214 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 EMCNQ9ULC0 261 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 PTPRQQ9UMZ3 2332 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 NAALAD2Q9Y3Q0 740 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 SLC22A7Q9Y694 548 aa14.96□□□□□ -0.01
BRAT1-202ENST00000421712 H0YIG0 161 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 PLIN3O60664 434 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 UGDHO60701 494 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 CLEC3AO75596 197 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 KLHL18O94889 574 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 NSA2O95478 260 aaKnown RBP14.95□□□□□ -0.02
BRAT1-202ENST00000421712 CLDN9O95484 217 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 ONECUT2O95948 504 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 PROCP04070 461 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 CPA3P15088 417 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 ALOX12P18054 663 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 TSPAN8P19075 237 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 IMPDH1P20839 514 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 HPDP32754 393 aaPredicted RBP14.95□□□□□ -0.02
BRAT1-202ENST00000421712 PRKAA2P54646 552 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 FOXL2P58012 376 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 PHEXP78562 749 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 MAT1AQ00266 395 aaKnown RBP14.95□□□□□ -0.02
BRAT1-202ENST00000421712 IL10RAQ13651 578 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 DSG2Q14126 1118 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 NKG7Q16617 165 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 CPSF6Q16630 551 aaKnown RBP eCLIP14.95□□□□□ -0.02
BRAT1-202ENST00000421712 SYT16Q17RD7 645 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 DEFB134Q4QY38 66 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 BEND6Q5SZJ8 279 aaPredicted RBP14.95□□□□□ -0.02
BRAT1-202ENST00000421712 TTC19Q6DKK2 380 aaPredicted RBP14.95□□□□□ -0.02
BRAT1-202ENST00000421712 ZYG11AQ6WRX3 759 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 MILR1Q7Z6M3 343 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 ARHGEF39Q8N4T4 335 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 CCNYL1Q8N7R7 359 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 UTP15Q8TED0 518 aaKnown RBP14.95□□□□□ -0.02
BRAT1-202ENST00000421712 TRPC4APQ8TEL6 797 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 SNRNP27Q8WVK2 155 aaKnown RBP14.95□□□□□ -0.02
BRAT1-202ENST00000421712 REPS1Q96D71 796 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms