RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 FRS3O43559 492 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 HCRTO43612 131 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 SPOPO43791 374 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 NUAK1O60285 661 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 HUS1O60921 280 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CLN5O75503 358 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ITGA10O75578 1167 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 STK17BO94768 372 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CDK14O94921 469 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 GAS8O95995 478 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CLPTM1O96005 669 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 IFNA2P01563 188 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 TFAP2AP05549 437 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CD48P09326 243 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 UQCRBP14927 111 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ANPEPP15144 967 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ITGA2P17301 1181 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 EEF1GP26641 437 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 HLA-FP30511 346 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 RRM2P31350 389 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 HNRNPH3P31942 346 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CRHR1P34998 444 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 DLSTP36957 453 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 PNPLA4P41247 253 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 LHX1P48742 406 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 SLC9A3P48764 834 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 PRIM2P49643 509 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 RAP1GDS1P52306 607 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ZNF135P52742 658 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 PDE1AP54750 535 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ST8SIA6P61647 398 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CSNK1G2P78368 415 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 COG7P83436 770 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CEBPZQ03701 1054 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 LRRC63Q05C16 580 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 LGALS3BPQ08380 585 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CDC16Q13042 620 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 MTM1Q13496 603 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 C1orf61Q13536 156 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 SELPLGQ14242 412 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 GALNT3Q14435 633 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 EFTUD2Q15029 972 aaKnown RBP eCLIP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 POLD3Q15054 466 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ASIC2Q16515 512 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 KYAT1Q16773 422 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 TRMT5Q32P41 509 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 TIGD2Q4W5G0 525 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 TNFAIP8L3Q5GJ75 292 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 C9orf64Q5T6V5 341 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 DUPD1Q68J44 220 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ANKRD40Q6AI12 368 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 HMBOX1Q6NT76 420 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 PODNL1Q6PEZ8 512 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 XKRXQ6PP77 449 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 KYAT3Q6YP21 454 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 MEX3BQ6ZN04 569 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 RGS9BPQ6ZS82 235 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ADIPOR2Q86V24 386 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 PIM3Q86V86 326 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 KCNMB4Q86W47 210 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 DNAAF5Q86Y56 855 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 UNC45BQ8IWX7 931 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ZC3H3Q8IXZ2 948 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ULK2Q8IYT8 1036 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ADGRG5Q8IZF4 528 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 RBFAQ8N0V3 343 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CCNYL1Q8N7R7 359 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ZNF565Q8N9K5 539 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 SPATA4Q8NEY3 305 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 OR6Y1Q8NGX8 325 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 STON2Q8WXE9 905 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 HAS1Q92839 578 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 STMN2Q93045 179 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 NMD3Q96D46 503 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 MTFMTQ96DP5 389 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 RTP4Q96DX8 246 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 MTBPQ96DY7 904 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 APIPQ96GX9 242 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ZNF486Q96H40 463 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 PLEKHA8Q96JA3 519 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 SGCZQ96LD1 299 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 PWWP2AQ96N64 755 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 FERMT1Q9BQL6 677 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 WACQ9BTA9 647 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 TRAF4Q9BUZ4 470 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 LRRC61Q9BV99 259 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ACAT2Q9BWD1 397 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 SPRY4Q9C004 299 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 MTMR12Q9C0I1 747 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 LSG1Q9H089 658 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 SLA2Q9H6Q3 261 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 LRRC19Q9H756 370 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 MMRN2Q9H8L6 949 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 VPS37BQ9H9H4 285 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 MRM3Q9HC36 420 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 LZTFL1Q9NQ48 299 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ABCB8Q9NUT2 735 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 PNPOQ9NVS9 261 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 NPAP1Q9NZP6 1156 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CHORDC1Q9UHD1 332 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms