RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CYP4F2P78329 520 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 SLC9A5Q14940 896 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 PRAMEF9Q5VWM5 478 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 MRPL14Q6P1L8 145 aaKnown RBP21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 MED27Q6P2C8 311 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 LRIG3Q6UXM1 1119 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 ABHD13Q7L211 337 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 SRRM1Q8IYB3 904 aaKnown RBP21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 METTL27Q8N6F8 245 aaPredicted RBP21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 PPP4R1Q8TF05 950 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 SMC6Q96SB8 1091 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 RUFY1Q96T51 708 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 C1QTNF3Q9BXJ4 246 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 SLC26A1Q9H2B4 701 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 NOL11Q9H8H0 719 aaKnown RBP21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 SLC22A11Q9NSA0 550 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 SENP1Q9P0U3 644 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 ADGRE2Q9UHX3 823 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 MID2Q9UJV3 735 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 NXT1Q9UKK6 140 aaKnown RBP21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 PCTPQ9UKL6 214 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 A0A0A6YYC8 382 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 H0YIG0 161 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 I3L1I5 382 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 NKX2-8O15522 239 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 FOXS1O43638 330 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 DLX3O60479 287 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 CLEC3AO75596 197 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 NSA2O95478 260 aaKnown RBP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 MYL2P10916 166 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 ITGAXP20702 1163 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 SERPINB1P30740 379 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 ARL1P40616 181 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 CCNG1P51959 295 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 HERVK_113P63132 956 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 OCA2Q04671 838 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 DSG2Q14126 1118 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 ERV3-1Q14264 604 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 BEND6Q5SZJ8 279 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 CEP85LQ5SZL2 805 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 GRHL2Q6ISB3 625 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 MYLK4Q86YV6 388 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 CCDC63Q8NA47 563 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 RDH11Q8TC12 318 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 CREB3L4Q8TEY5 395 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 CCT6BQ92526 530 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 REPS1Q96D71 796 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 MOCOSQ96EN8 888 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 MAGEB10Q96LZ2 347 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 CATSPER2Q96P56 530 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 ZIM3Q96PE6 472 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 YIPF2Q9BWQ6 316 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 ERVK-6Q9BXR3 956 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 RHBGQ9H310 441 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 WDR54Q9H977 334 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 MKS1Q9NXB0 559 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 ZNF282Q9UDV7 671 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 ZNF490Q9ULM2 529 aaPredicted RBP21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 PCDHGA11Q9Y5H2 935 aa21.94■■□□□ 1.1
SMARCB1-205ENST00000417137 PLIN3O60664 434 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 CLDN9O95484 217 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 PROCP04070 461 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 RPS17P08708 135 aaKnown RBP21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 CD22P20273 847 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 IMPDH1P20839 514 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 FOLR3P41439 243 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 PRKAA2P54646 552 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 RPS18P62269 152 aaKnown RBP21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 ZCCHC10Q8TBK6 192 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 CRELD1Q96HD1 420 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 APOPT1Q96IL0 206 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 NTMT1Q9BV86 223 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 SLC6A16Q9GZN6 736 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 EMCNQ9ULC0 261 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 MRPS2Q9Y399 296 aaKnown RBP21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 PTRH2Q9Y3E5 179 aaKnown RBP21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 MAP4K5Q9Y4K4 846 aa21.93■■□□□ 1.1
SMARCB1-205ENST00000417137 FASNP49327 2511 aaKnown RBP21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 CTIFO43310 598 aaKnown RBP21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 SUPT7LO94864 414 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 PRKAR1AP10644 381 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 ALOX12P18054 663 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 NAA20P61599 178 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 CDC20Q12834 499 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 SSPNQ14714 243 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 UGT8Q16880 541 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 ZNF678Q5SXM1 525 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 ZYG11AQ6WRX3 759 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 COX15Q7KZN9 410 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 LAS2Q8IYD9 372 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 DTWD1Q8N5C7 304 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 BANPQ8N9N5 519 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 L3MBTL4Q8NA19 623 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 OR9A4Q8NGU2 314 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 OR2Y1Q8NGV0 311 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 ZNF483Q8TF39 744 aaPredicted RBP21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 MKKSQ9NPJ1 570 aaPredicted RBP21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 TRPC4Q9UBN4 977 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms