RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 CPQQ9Y646 472 aa0.69□□□□□ -2.3
GTF3C3-203ENST00000416690 UNC13AQ9UPW8 1703 aa0.69□□□□□ -2.3
GTF3C3-203ENST00000416690 COL1A2P08123 1366 aa0.69□□□□□ -2.3
GTF3C3-203ENST00000416690 CFAP65Q6ZU64 1925 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 IGKV2-28A0A075B6P5 120 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 TRBV5-4A0A0C4DH59 114 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 TEX48A0A1B0GUV7 120 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 BCLAF3A2AJT9 711 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 FAM231BA6NCW3 169 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 CASTOR2A6NHX0 329 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 NKX6-3A6NJ46 265 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 C17orf51A8MQB3 221 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 A8MV72 311 aaPredicted RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 CA11O75493 328 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 TOMM70O94826 608 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 IGKV2D-28P01615 120 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 ZNF44P15621 663 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 PMELP40967 661 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 BRCC3P46736 316 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 FNTAP49354 379 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 KRTAP12-3P60328 96 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 PRKG2Q13237 762 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 GCKRQ14397 625 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 TSTQ16762 297 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 PCK2Q16822 640 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 MUC21Q5SSG8 566 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 TEX35Q5T0J7 233 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 AGAP6Q5VW22 663 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 CYB5D1Q6P9G0 228 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 CTR9Q6PD62 1173 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 PXKQ7Z7A4 578 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 ZNF589Q86UQ0 364 aaPredicted RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 ZNF547Q8IVP9 402 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 CEND1Q8N111 149 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 ZNF540Q8NDQ6 660 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 ADAMTS16Q8TE57 1224 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 RFFLQ8WZ73 363 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 FAF2Q96CS3 445 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 ZBED6CLQ96FA7 236 aaPredicted RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 CDRT15Q96T59 188 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 PAPOLGQ9BWT3 736 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 SLC25A39Q9BZJ4 359 aaPredicted RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 MMP27Q9H306 513 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 IKZF5Q9H5V7 419 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 SP140LQ9H930 580 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 RAVER2Q9HCJ3 691 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 MYNNQ9NPC7 610 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 EQTNQ9NQ60 294 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 STK26Q9P289 416 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 SEC63Q9UGP8 760 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 FBXL4Q9UKA2 621 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 NEU3Q9UQ49 428 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 LRRFIP2Q9Y608 721 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 TNRQ92752 1358 aa0.68□□□□□ -2.3
GTF3C3-203ENST00000416690 IGKV2D-24A0A075B6R9 120 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 IGKV1D-17A0A075B6S4 117 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 LRCOL1A6NCL2 159 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 IGLON5A6NGN9 336 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 FRG2CA6NGY1 282 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 CCT8L1PA6NM43 557 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 FOXI3A8MTJ6 420 aaPredicted RBP0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 ZNF487B1APH4 448 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 TRIM49D1C9J1S8 452 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 PAPSS1O43252 624 aaPredicted RBP0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 TMEM63AO94886 807 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 RTN3O95197 1032 aaPredicted RBP0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 PRKAR2BP31323 418 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 SLC25A1P53007 311 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 PNLIPRP2P54317 469 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 ADARP55265 1226 aaKnown RBP0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 RHBDL3P58872 404 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 PRKCEQ02156 737 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 CRMP1Q14194 572 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 KCTD19Q17RG1 926 aaPredicted RBP0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 SPANXN4Q5MJ08 99 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 OTPQ5XKR4 325 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 PRR27Q6MZM9 219 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 PRSS55Q6UWB4 352 aaPredicted RBP0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 TMTC3Q6ZXV5 915 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 IKBIPQ70UQ0 350 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 CPEB2Q7Z5Q1 589 aaKnown RBP0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 ABI3BPQ7Z7G0 1075 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 NME8Q8N427 588 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 WDTC1Q8N5D0 677 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 GANCQ8TET4 914 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 SNRNP27Q8WVK2 155 aaKnown RBP0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 ROBO4Q8WZ75 1007 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 HDAC11Q96DB2 347 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 CCDC34Q96HJ3 373 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 SCLT1Q96NL6 688 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 TECTBQ96PL2 329 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 ALKBH3Q96Q83 286 aaPredicted RBP0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 TNFRSF13CQ96RJ3 184 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 CCT8L2Q96SF2 557 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 IL12RB2Q99665 862 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 HSD17B14Q9BPX1 270 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 PRRG4Q9BZD6 226 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 PPCSQ9HAB8 311 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 KCNK13Q9HB14 408 aa0.67□□□□□ -2.3
GTF3C3-203ENST00000416690 UBN1Q9NPG3 1134 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms