RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 NDUFS4O43181 175 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 RAD51CO43502 376 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 CDC123O75794 336 aaPredicted RBP14.25□□□□□ -0.13
UBXN4-203ENST00000416538 CXCR2P25025 360 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 SSTR1P30872 391 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 TNFSF10P50591 281 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 CCR8P51685 355 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 RHAGQ02094 409 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 SRSF11Q05519 484 aaKnown RBP14.25□□□□□ -0.13
UBXN4-203ENST00000416538 C2orf54Q08AI8 447 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 HYAL2Q12891 473 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 CDC16Q13042 620 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 TLR1Q15399 786 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 MINDY4Q4G0A6 757 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 ZBED8Q8IZ13 594 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 GABPB2Q8TAK5 448 aaPredicted RBP14.25□□□□□ -0.13
UBXN4-203ENST00000416538 SLC5A11Q8WWX8 675 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 VPS50Q96JG6 964 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 LMF1Q96S06 567 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 NPAS2Q99743 824 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 SLX1AQ9BQ83 275 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 ANKHQ9HCJ1 492 aa14.25□□□□□ -0.13
UBXN4-203ENST00000416538 PCNX1Q96RV3 2341 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 TRBC2A0A5B9 178 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 WIPF3A6NGB9 483 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 OR1F1O43749 312 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 MAN1A2O60476 641 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 CLDN1O95832 211 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 WDPCPO95876 746 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 ENO2P09104 434 aaPredicted RBP14.24□□□□□ -0.13
UBXN4-203ENST00000416538 HIST1H2AGP0C0S8 130 aaPredicted RBP14.24□□□□□ -0.13
UBXN4-203ENST00000416538 SLC35G6P0C7Q6 338 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 HIST1H2ADP20671 130 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 SCTRP47872 440 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 ST13P50502 369 aaKnown RBP14.24□□□□□ -0.13
UBXN4-203ENST00000416538 TDGF1P3P51864 188 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 TSNQ15631 228 aaKnown RBP14.24□□□□□ -0.13
UBXN4-203ENST00000416538 MFSD4BQ5TF39 518 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 FCRLBQ6BAA4 426 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 CPEB2Q7Z5Q1 589 aaKnown RBP14.24□□□□□ -0.13
UBXN4-203ENST00000416538 ANKRD37Q7Z713 158 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 TMPRSS11BQ86T26 416 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 ST6GALNAC3Q8NDV1 305 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 FAR1Q8WVX9 515 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 PEX11GQ96HA9 241 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 HIST1H2AHQ96KK5 128 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 CYTH2Q99418 400 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 HIST1H2AJQ99878 128 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 H2AFJQ9BTM1 129 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 RHOJQ9H4E5 214 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 CAB39LQ9H9S4 337 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 SLC22A7Q9Y694 548 aa14.24□□□□□ -0.13
UBXN4-203ENST00000416538 GALR3O60755 368 aaPredicted RBP14.23□□□□□ -0.13
UBXN4-203ENST00000416538 ZNF888P0CJ79 500 aaPredicted RBP14.23□□□□□ -0.13
UBXN4-203ENST00000416538 ARG2P78540 354 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 TRADDQ15628 312 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 DEFB134Q4QY38 66 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 ZNF324BQ6AW86 544 aaPredicted RBP14.23□□□□□ -0.13
UBXN4-203ENST00000416538 RIPOR1Q6ZS17 1223 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 THOC6Q86W42 341 aaKnown RBP14.23□□□□□ -0.13
UBXN4-203ENST00000416538 SPATA6LQ8N4H0 392 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 OR1N1Q8NGS0 311 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 NT5CQ8TCD5 201 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 TMEM79Q9BSE2 394 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 TUBB6Q9BUF5 446 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 KLHL31Q9H511 634 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 SLC22A14Q9Y267 594 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 MTO1Q9Y2Z2 717 aaKnown RBP14.23□□□□□ -0.13
UBXN4-203ENST00000416538 OARD1Q9Y530 152 aa14.23□□□□□ -0.13
UBXN4-203ENST00000416538 PCDH17O14917 1159 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 PHGDHO43175 533 aaKnown RBP14.22□□□□□ -0.13
UBXN4-203ENST00000416538 PRAMEF4O60810 478 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 WISP2O76076 250 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 ALOX12P18054 663 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 GRK3P35626 688 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 GDF5P43026 501 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 PAFAH1B1P43034 410 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 SLC6A12P48065 614 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 GPX6P59796 221 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 ABRAXAS2Q15018 415 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 FBXO48Q5FWF7 155 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 PRAMEF9Q5VWM5 478 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 PLAG1Q6DJT9 500 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 ADNP2Q6IQ32 1131 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 RPUSD3Q6P087 351 aaKnown RBP14.22□□□□□ -0.13
UBXN4-203ENST00000416538 SPATA4Q8NEY3 305 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 UTP15Q8TED0 518 aaKnown RBP14.22□□□□□ -0.13
UBXN4-203ENST00000416538 ATL1Q8WXF7 558 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 HAS2Q92819 552 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 ERP44Q9BS26 406 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 TRIM54Q9BYV2 358 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 SLC6A16Q9GZN6 736 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 PELI2Q9HAT8 420 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 SAYSD1Q9NPB0 183 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 ZFP69BQ9UJL9 534 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
UBXN4-203ENST00000416538 NOTCH2Q04721 2471 aa14.22□□□□□ -0.13
UBXN4-203ENST00000416538 TCRBV9S1A1TA0A576 114 aa14.21□□□□□ -0.13
UBXN4-203ENST00000416538 CHST10O43529 356 aa14.21□□□□□ -0.13
UBXN4-203ENST00000416538 TBX6O95947 436 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms