RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TEX9Q8N6V9 391 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 KCT2Q8NC54 265 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 ZNF740Q8NDX6 193 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 OR9A4Q8NGU2 314 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 METTL21AQ8WXB1 218 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 ATP6V1E2Q96A05 226 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 BBC3Q96PG8 261 aaPredicted RBP13.96□□□□□ -0.17
CHD1-202ENST00000414220 SPSB2Q99619 263 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 MACROD1Q9BQ69 325 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 TGIF2Q9GZN2 237 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 MRPL46Q9H2W6 279 aaKnown RBP13.96□□□□□ -0.17
CHD1-202ENST00000414220 ATP13A2Q9NQ11 1180 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 CTSFQ9UBX1 484 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 DCDC2Q9UHG0 476 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 ADGRE2Q9UHX3 823 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 C3orf18Q9UK00 162 aa13.96□□□□□ -0.17
CHD1-202ENST00000414220 FAM208BQ5VWN6 2430 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 AGPSO00116 658 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 KLK8O60259 260 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 CLEC3AO75596 197 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 MED26O95402 600 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 GSTA1P08263 222 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 CYC1P08574 325 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 IL1RNP18510 177 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 KRT15P19012 456 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 ARL1P40616 181 aaPredicted RBP13.95□□□□□ -0.18
CHD1-202ENST00000414220 CCL11P51671 97 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 KLC1Q07866 573 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 IFFO1Q0D2I5 559 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 ATP1A4Q13733 1029 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 COL9A2Q14055 689 aaPredicted RBP13.95□□□□□ -0.18
CHD1-202ENST00000414220 DOC2AQ14183 400 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 NAA30Q147X3 362 aaPredicted RBP13.95□□□□□ -0.18
CHD1-202ENST00000414220 PCBP2Q15366 365 aaKnown RBP eCLIP13.95□□□□□ -0.18
CHD1-202ENST00000414220 VWA2Q5GFL6 755 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 TECRLQ5HYJ1 363 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 MFSD4BQ5TF39 518 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 WDR93Q6P2C0 686 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 MED27Q6P2C8 311 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 PCSK4Q6UW60 755 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 PRSS58Q8IYP2 241 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 PLD6Q8N2A8 252 aaKnown RBP13.95□□□□□ -0.18
CHD1-202ENST00000414220 EXD3Q8N9H8 876 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 SRFBP1Q8NEF9 429 aaKnown RBP13.95□□□□□ -0.18
CHD1-202ENST00000414220 OR51Q1Q8NH59 317 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 REPS1Q96D71 796 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 WDR34Q96EX3 536 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 GPR78Q96P69 363 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 SPNS1Q9H2V7 528 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 ACTR8Q9H981 624 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 P4HTMQ9NXG6 502 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 COPG2Q9UBF2 871 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 XPR1Q9UBH6 696 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 TBK1Q9UHD2 729 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 NAALAD2Q9Y3Q0 740 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 HEMK1Q9Y5R4 338 aaPredicted RBP13.95□□□□□ -0.18
CHD1-202ENST00000414220 ANKRD12Q6UB98 2062 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 SEC16AO15027 2179 aa13.95□□□□□ -0.18
CHD1-202ENST00000414220 STX16-NPEPL1H3BU86 382 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 SGK494L7N484 410 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 PSMD12O00232 456 aaPredicted RBP13.94□□□□□ -0.18
CHD1-202ENST00000414220 STX16O14662 325 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 UGDHO60701 494 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 CNOT3O75175 753 aaKnown RBP13.94□□□□□ -0.18
CHD1-202ENST00000414220 CDH16O75309 829 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 KLHL18O94889 574 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 UMODP07911 640 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 MTHFD2P13995 350 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 JAK1P23458 1154 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 HNF4AP41235 474 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 CASP2P42575 452 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 CCT5P48643 541 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 AGTR2P50052 363 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 VSNL1P62760 191 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 AP2B1P63010 937 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 GTF2H2Q13888 395 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 RCN2Q14257 317 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 TUBB8Q3ZCM7 444 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 TOR1AIP1Q5JTV8 583 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 FAM69BQ5VUD6 431 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 LIPJQ5W064 366 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 GTF2H2CQ6P1K8 395 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 TRIM40Q6P9F5 258 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 SHISA6Q6ZSJ9 500 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 TDRPQ86YL5 185 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 MYLK4Q86YV6 388 aaPredicted RBP13.94□□□□□ -0.18
CHD1-202ENST00000414220 ARHGEF39Q8N4T4 335 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 PTGR2Q8N8N7 351 aaPredicted RBP13.94□□□□□ -0.18
CHD1-202ENST00000414220 ANKRD53Q8N9V6 530 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 GAL3ST3Q96A11 431 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 ABHD17AQ96GS6 310 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 MAGEB10Q96LZ2 347 aaPredicted RBP13.94□□□□□ -0.18
CHD1-202ENST00000414220 CENPKQ9BS16 269 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 SLC25A23Q9BV35 468 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 SLC6A16Q9GZN6 736 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 ROGDIQ9GZN7 287 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 SYNPO2LQ9H987 977 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 C19orf25Q9UFG5 118 aaPredicted RBP13.94□□□□□ -0.18
CHD1-202ENST00000414220 PCDHGB7Q9Y5F8 929 aa13.94□□□□□ -0.18
CHD1-202ENST00000414220 HEATR5BQ9P2D3 2071 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms