RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 DENND6AQ8IWF6 608 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 PHF10Q8WUB8 498 aaKnown RBP15.71■□□□□ 0.11
MRPL55-220ENST00000411464 ALKBH8Q96BT7 664 aaKnown RBP15.71■□□□□ 0.11
MRPL55-220ENST00000411464 CCDC138Q96M89 665 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 GPR21Q99679 349 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 VKORC1Q9BQB6 163 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 RBCK1Q9BYM8 510 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 MCCC2Q9HCC0 563 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 IGSF5Q9NSI5 407 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 COQ3Q9NZJ6 369 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 PPT2Q9UMR5 302 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 MED16Q9Y2X0 877 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 COMMD10Q9Y6G5 202 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 HIVEP1P15822 2718 aa15.71■□□□□ 0.11
MRPL55-220ENST00000411464 FAM237BA0A1B0GVD1 139 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 SDR42E2A6NKP2 422 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 ZNHIT1O43257 154 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 LCMT2O60294 686 aaKnown RBP15.7■□□□□ 0.1
MRPL55-220ENST00000411464 FGGP02679 453 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 CYB561P49447 251 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 SLC26A5P58743 744 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 MPP1Q00013 466 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 HSF1Q00613 529 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 MEX3BQ6ZN04 569 aaKnown RBP15.7■□□□□ 0.1
MRPL55-220ENST00000411464 SPNS2Q8IVW8 549 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 PALM2Q8IXS6 379 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 CPNE9Q8IYJ1 553 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 CD200R1Q8TD46 325 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 TMEM125Q96AQ2 219 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 ZNF669Q96BR6 464 aaPredicted RBP15.7■□□□□ 0.1
MRPL55-220ENST00000411464 SDCCAG3Q96C92 435 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 OLFM1Q99784 485 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 LANCL2Q9NS86 450 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 HOMER3Q9NSC5 361 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 CCDC168Q8NDH2 2452 aa15.7■□□□□ 0.1
MRPL55-220ENST00000411464 ZNF860A6NHJ4 632 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 EIF3FO00303 357 aaPredicted RBP15.69■□□□□ 0.1
MRPL55-220ENST00000411464 FANCGO15287 622 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 NME2P1O60361 137 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 F7P08709 466 aaPredicted RBP15.69■□□□□ 0.1
MRPL55-220ENST00000411464 NME2P22392 152 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 JAK1P23458 1154 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 CCND1P24385 295 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 VPS41P49754 854 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 SKP1P63208 163 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 TESK1Q15569 626 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 TRIP13Q15645 432 aaPredicted RBP15.69■□□□□ 0.1
MRPL55-220ENST00000411464 AGTRAPQ6RW13 159 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 SPNS3Q6ZMD2 512 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 CAND1Q86VP6 1230 aaKnown RBP15.69■□□□□ 0.1
MRPL55-220ENST00000411464 CYP4X1Q8N118 509 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 MFSD9Q8NBP5 474 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 OR5T3Q8NGG3 340 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 ELP5Q8TE02 316 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 TSLPQ969D9 159 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 TBC1D20Q96BZ9 403 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 ENKD1Q9H0I2 346 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 ATG10Q9H0Y0 220 aa15.69■□□□□ 0.1
MRPL55-220ENST00000411464 FHP07954 510 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 CDH1P12830 882 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 TPP2P29144 1249 aaPredicted RBP15.68■□□□□ 0.1
MRPL55-220ENST00000411464 SLC1A2P43004 574 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 GPS1Q13098 491 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 NAE1Q13564 534 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 KCTD19Q17RG1 926 aaPredicted RBP15.68■□□□□ 0.1
MRPL55-220ENST00000411464 RNFT1Q5M7Z0 435 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 ZNF468Q5VIY5 522 aaPredicted RBP15.68■□□□□ 0.1
MRPL55-220ENST00000411464 LRRC8EQ6NSJ5 796 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 UGT3A1Q6NUS8 523 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 LMNTD2Q8IXW0 634 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 KIF2BQ8N4N8 673 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 CPSF7Q8N684 471 aaKnown RBP15.68■□□□□ 0.1
MRPL55-220ENST00000411464 CALML6Q8TD86 181 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 DMRTA2Q96SC8 542 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 PARVBQ9HBI1 364 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 C20orf96Q9NUD7 363 aaPredicted RBP15.68■□□□□ 0.1
MRPL55-220ENST00000411464 SH2B3Q9UQQ2 575 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 PDE10AQ9Y233 779 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 ASB1Q9Y576 335 aa15.68■□□□□ 0.1
MRPL55-220ENST00000411464 CPAMD8Q8IZJ3 1885 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 ZCWPW2A0A1B0GU75 182 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 ADAM10O14672 748 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 NDUFS4O43181 175 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 CHST10O43529 356 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 GALR3O60755 368 aaPredicted RBP15.67■□□□□ 0.1
MRPL55-220ENST00000411464 B4GALT2O60909 372 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 KRT38O76015 456 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 C8GP07360 202 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 HIST1H2AGP0C0S8 130 aaPredicted RBP15.67■□□□□ 0.1
MRPL55-220ENST00000411464 MLNP12872 115 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 NPPBP16860 134 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 HIST1H2ADP20671 130 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 PTGS2P35354 604 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 MAGEA6P43360 314 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 RGS4P49798 205 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 CCR8P51685 355 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 MEF2AQ02078 507 aaPredicted RBP15.67■□□□□ 0.1
MRPL55-220ENST00000411464 DEFB134Q4QY38 66 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 NIPAL1Q6NVV3 410 aa15.67■□□□□ 0.1
MRPL55-220ENST00000411464 LCTLQ6UWM7 567 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms