RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ANGPT1Q15389 498 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 TLR1Q15399 786 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 CCDC6Q16204 474 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 HLA-BQ31612 363 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 C6orf10Q5SRN2 563 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 DEPDC1Q5TB30 811 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 NKAIN2Q5VXU1 208 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 FCRL6Q6DN72 434 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 BNC2Q6ZN30 1099 aaPredicted RBP11.9□□□□□ -0.5
CHMP3-204ENST00000409727 DGLUCYQ7Z3D6 616 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 ANKRD46Q86W74 232 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 HPS6Q86YV9 775 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 TTLQ8NG68 377 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 OR7A2PQ8NGA2 310 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 OR2I1PQ8NGU4 316 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 SLC13A3Q8WWT9 602 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 OR52E6Q96RD3 313 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 ZSCAN32Q9NX65 697 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 LRIT1Q9P2V4 623 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 CROTQ9UKG9 612 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 PCDHGA7Q9Y5G6 932 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 PCDHGA4Q9Y5G9 962 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 RNF215Q9Y6U7 377 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 TNRC6BQ9UPQ9 1833 aaKnown RBP11.9□□□□□ -0.51
CHMP3-204ENST00000409727 A0A0J9YY10 115 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 LRIT2A6NDA9 550 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 CLEC3AO75596 197 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 COX7A2P14406 83 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 ACPPP15309 386 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 TCN1P20061 433 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 S100A3P33764 101 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 MSX2P35548 267 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 CLNS1AP54105 237 aaKnown RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 ZNF763Q0D2J5 394 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 SLC5A12Q1EHB4 618 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 C6orf132Q5T0Z8 1188 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 CCNYL2Q5T2Q4 361 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 FBXO42Q6P3S6 717 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 CYB5D1Q6P9G0 228 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 OGFOD3Q6PK18 319 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 DNAJC14Q6Y2X3 702 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 FAM92BQ6ZTR7 304 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 SDR16C5Q8N3Y7 309 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 AVL9Q8NBF6 648 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 MFSD9Q8NBP5 474 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 GLB1L3Q8NCI6 653 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 TSPEARQ8WU66 669 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 WDR60Q8WVS4 1066 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 METTL2AQ96IZ6 378 aaKnown RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 ZC3H10Q96K80 434 aaKnown RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 C17orf62Q9BQA9 187 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 CENPKQ9BS16 269 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 ZMYND15Q9H091 742 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 DENND2DQ9H6A0 471 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 AHSPQ9NZD4 102 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 SLC7A8Q9UHI5 535 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 AP1M2Q9Y6Q5 423 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 LAMA1P25391 3075 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 GOLGA4Q13439 2230 aaKnown RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 OR2A25A4D2G3 310 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 IL6P05231 212 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 PROS1P07225 676 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 EFNA1P20827 205 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 PRPS1L1P21108 318 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 CDH3P22223 829 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 TPP2P29144 1249 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 AHRP35869 848 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 TAS2R50P59544 299 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 RPS15AP62244 130 aaKnown RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 PHC1P78364 1004 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 MC1RQ01726 317 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 MAPKAPK3Q16644 382 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 UGT8Q16880 541 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 TOR1AIP1Q5JTV8 583 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 RIMKLAQ8IXN7 391 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 SLC35F3Q8IY50 421 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 FAM9CQ8IZT9 166 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 TMEM132CQ8N3T6 1108 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 FBXW8Q8N3Y1 598 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 ARL10Q8N8L6 244 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 Q8N9G6 341 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 FAM156AQ8NDB6 213 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 TRPV3Q8NET8 790 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 DNAJB14Q8TBM8 379 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 C16orf78Q8WTQ4 265 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 RGMAQ96B86 450 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 ROPN1LQ96C74 230 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 LRRC58Q96CX6 371 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 TMEM74Q96NL1 305 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 ZNF717Q9BY31 904 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 AICDAQ9GZX7 198 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 ABCG4Q9H172 646 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 MMADHCQ9H3L0 296 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-204ENST00000409727 SMOC1Q9H4F8 434 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 GAREM1Q9H706 876 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 TMEM45AQ9NWC5 275 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 GID8Q9NWU2 228 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 KLHL3Q9UH77 587 aa11.89□□□□□ -0.51
CHMP3-204ENST00000409727 MYO15AQ9UKN7 3530 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms