RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 TMPRSS3P57727 454 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 UBE2IP63279 158 aaKnown RBP16.04■□□□□ 0.16
CGREF1-206ENST00000405600 CSTF3Q12996 717 aaKnown RBP16.04■□□□□ 0.16
CGREF1-206ENST00000405600 PRKG2Q13237 762 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 SQSTM1Q13501 440 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 DOC2AQ14183 400 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 RPE65Q16518 533 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 C6orf136Q5SQH8 315 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 ATG9BQ674R7 924 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 FNDC5Q8NAU1 212 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 PPFIBP2Q8ND30 876 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 RCBTB1Q8NDN9 531 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 SLC5A11Q8WWX8 675 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 MCUR1Q96AQ8 359 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 SLC7A6OSQ96CW6 309 aaPredicted RBP16.04■□□□□ 0.16
CGREF1-206ENST00000405600 CXorf40BQ96DE9 158 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 WDR34Q96EX3 536 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 DPH1Q9BZG8 443 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 MMADHCQ9H3L0 296 aaPredicted RBP16.04■□□□□ 0.16
CGREF1-206ENST00000405600 PRM3Q9NNZ6 103 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 NOP53Q9NZM5 478 aaKnown RBP16.04■□□□□ 0.16
CGREF1-206ENST00000405600 CACNA1GO43497 2377 aa16.04■□□□□ 0.16
CGREF1-206ENST00000405600 KCNE1BA0A087WTH5 132 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 CDRT15L2A8MXV6 281 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 E7EQ34 232 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 H0YIV9 168 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 RSL1D1O76021 490 aaKnown RBP16.03■□□□□ 0.16
CGREF1-206ENST00000405600 C1GALT1C1LP0DN25 315 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 NPPBP16860 134 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 HTR6P50406 440 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 RAB28P51157 221 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 TRA2AQ13595 282 aaKnown RBP eCLIP16.03■□□□□ 0.16
CGREF1-206ENST00000405600 E2F2Q14209 437 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 GRB7Q14451 532 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 ABRAXAS2Q15018 415 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 AP5B1Q2VPB7 878 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 AGKQ53H12 422 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 SGO1Q5FBB7 561 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 CACHD1Q5VU97 1274 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 MED27Q6P2C8 311 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 SCIMPQ6UWF3 145 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 C17orf64Q86WR6 236 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 LRRC56Q8IYG6 542 aaPredicted RBP16.03■□□□□ 0.16
CGREF1-206ENST00000405600 KRT78Q8N1N4 520 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 OR2L8Q8NGY9 312 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 HMGCLL1Q8TB92 370 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 TSPEARQ8WU66 669 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 ZFPM2Q8WW38 1151 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 METTL2AQ96IZ6 378 aaKnown RBP16.03■□□□□ 0.16
CGREF1-206ENST00000405600 UBL7Q96S82 380 aaPredicted RBP16.03■□□□□ 0.16
CGREF1-206ENST00000405600 CMKLR1Q99788 373 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 NUDT22Q9BRQ3 303 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 SLC25A23Q9BV35 468 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 PITHD1Q9GZP4 211 aaPredicted RBP16.03■□□□□ 0.16
CGREF1-206ENST00000405600 KIR3DX1Q9H7L2 352 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 EFCAB1Q9HAE3 211 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 PELI2Q9HAT8 420 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 BRF2Q9HAW0 419 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 LRTM1Q9HBL6 345 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 C1orf109Q9NX04 203 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 CIDEBQ9UHD4 219 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 ADGRE2Q9UHX3 823 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 WDR37Q9Y2I8 494 aa16.03■□□□□ 0.16
CGREF1-206ENST00000405600 CFAP20Q9Y6A4 193 aaKnown RBP16.03■□□□□ 0.16
CGREF1-206ENST00000405600 LOC100653049A0A140TA62 436 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 DYTNA2CJ06 578 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 BBIP1A8MTZ0 92 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 KRT34O76011 436 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 CCNDBP1O95273 360 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 PDYNP01213 254 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 PRB1P04280 392 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 SNRPB2P08579 225 aaKnown RBP16.02■□□□□ 0.16
CGREF1-206ENST00000405600 KRT16P08779 473 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 PRPH2P23942 346 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 CD1CP29017 333 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 SHMT2P34897 504 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 ZFP36L1Q07352 338 aaKnown RBP16.02■□□□□ 0.16
CGREF1-206ENST00000405600 CLCA4Q14CN2 919 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 PDCD4Q53EL6 469 aaKnown RBP16.02■□□□□ 0.16
CGREF1-206ENST00000405600 TCHHL1Q5QJ38 904 aaPredicted RBP16.02■□□□□ 0.16
CGREF1-206ENST00000405600 SNAP47Q5SQN1 464 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 IGF2-ASQ6U949 168 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 NXPE4Q6UWF7 544 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 C16orf89Q6UX73 402 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 SLCO4C1Q6ZQN7 724 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 Q6ZSR9 355 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 TMPRSS11BQ86T26 416 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 SNX32Q86XE0 403 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 OR4D9Q8NGE8 314 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 MARK4Q96L34 752 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 OR4K3Q96R72 315 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 MRPL1Q9BYD6 325 aaKnown RBP16.02■□□□□ 0.16
CGREF1-206ENST00000405600 SDR39U1Q9NRG7 319 aaPredicted RBP16.02■□□□□ 0.16
CGREF1-206ENST00000405600 AIG1Q9NVV5 245 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 ZIM2Q9NZV7 527 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 TMED5Q9Y3A6 229 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 PTGDR2Q9Y5Y4 395 aa16.02■□□□□ 0.16
CGREF1-206ENST00000405600 KRT87PA6NCN2 255 aa16.01■□□□□ 0.15
CGREF1-206ENST00000405600 NPIPB8E9PQR5 432 aa16.01■□□□□ 0.15
CGREF1-206ENST00000405600 LSM1O15116 133 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms