RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 OR51Q1Q8NH59 317 aa17.2■□□□□ 0.34
PTPRN2-204ENST00000404321 NACC2Q96BF6 587 aa17.2■□□□□ 0.34
PTPRN2-204ENST00000404321 SARGQ9BW04 601 aa17.2■□□□□ 0.34
PTPRN2-204ENST00000404321 TSPYL1Q9H0U9 437 aa17.2■□□□□ 0.34
PTPRN2-204ENST00000404321 CNOT10Q9H9A5 744 aaKnown RBP17.2■□□□□ 0.34
PTPRN2-204ENST00000404321 DNAJC11Q9NVH1 559 aa17.2■□□□□ 0.34
PTPRN2-204ENST00000404321 UBXN8O00124 270 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 CCNT2O60583 730 aaKnown RBP17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 DNAJB6O75190 326 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 C2P06681 752 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 ZNF888P0CJ79 500 aaPredicted RBP17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 C1GALT1C1LP0DN25 315 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 XCR1P46094 333 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 MLLT10P55197 1068 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 RAB8AP61006 207 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 OLR1P78380 273 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 RGS1Q08116 209 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 Q0VFX4 171 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 PWP1Q13610 501 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 SLBPQ14493 270 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 IGFBP7Q16270 282 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 DEFB134Q4QY38 66 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 KLHDC8AQ8IYD2 350 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 AMER2Q8N7J2 671 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 STAG3L4Q8TBR4 150 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 SMAD5Q99717 465 aaKnown RBP17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 TGIF2Q9GZN2 237 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 VPS11Q9H270 941 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 ZNF552Q9H707 407 aaPredicted RBP17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 ZBTB20Q9HC78 741 aaPredicted RBP17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 CCDC88CQ9P219 2028 aa17.19■□□□□ 0.34
PTPRN2-204ENST00000404321 A0A096LPK6 155 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 PRAMEF4O60810 478 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 H2AFYO75367 372 aaKnown RBP17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 STK16O75716 305 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 CDC123O75794 336 aaPredicted RBP17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 BMP10O95393 424 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 ALDOAP04075 364 aaKnown RBP17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 INHBAP08476 426 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 CXCR2P25025 360 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 GGT5P36269 586 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 CD97P48960 835 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 AGTR2P50052 363 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 PRAMEF9Q5VWM5 478 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 ATG9BQ674R7 924 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 CENPLQ8N0S6 344 aaPredicted RBP17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 PDPRQ8NCN5 879 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 NT5CQ8TCD5 201 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 PEX11GQ96HA9 241 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 THOC3Q96J01 351 aaKnown RBP17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 VN1R1Q9GZP7 353 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 KLHL31Q9H511 634 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 PTBP2Q9UKA9 531 aaKnown RBP17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 SLC22A7Q9Y694 548 aa17.18■□□□□ 0.34
PTPRN2-204ENST00000404321 TNRC6AQ8NDV7 1962 aaKnown RBP17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 A0A087X1B8 175 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 NSG1A0A0A6YYJ2 146 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 POC1B-GALNT4F8VUJ3 575 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 GALR3O60755 368 aaPredicted RBP17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 KERAO60938 352 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 IPO13O94829 963 aaKnown RBP17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 HPP00738 406 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 ALPPP05187 535 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 COX6A1P12074 109 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 ALOX12P18054 663 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 TYK2P29597 1187 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 AHRP35869 848 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 SERPINB8P50452 374 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 HERC3Q15034 1050 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 PDK4Q16654 411 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 TOR1AIP1Q5JTV8 583 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 IFT20Q8IY31 132 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 AFAP1L2Q8N4X5 818 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 RBMXL3Q8N7X1 1067 aaKnown RBP17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 TRPV3Q8NET8 790 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 UTP15Q8TED0 518 aaKnown RBP17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 SLC44A1Q8WWI5 657 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 CCT6BQ92526 530 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 VPS50Q96JG6 964 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 ATOH8Q96SQ7 321 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 PAFAH2Q99487 392 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 NUDT4Q9NZJ9 180 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 IKBKGQ9Y6K9 419 aa17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 MDC1Q14676 2089 aaKnown RBP17.17■□□□□ 0.34
PTPRN2-204ENST00000404321 IGHV3-20A0A0C4DH32 117 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 TTLL8A6PVC2 850 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 C4orf51C9J302 202 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 CLGNO14967 610 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 DPM1O60762 260 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 WISP1O95388 367 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 HYAL2Q12891 473 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 XKR6Q5GH73 641 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 CDKL4Q5MAI5 379 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 IRAK1BP1Q5VVH5 260 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 ADNP2Q6IQ32 1131 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 TMIGD1Q6UXZ0 262 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 LANCL3Q6ZV70 420 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 NDUFAF7Q7L592 441 aa17.16■□□□□ 0.34
PTPRN2-204ENST00000404321 GSPT2Q8IYD1 628 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms