RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 HAT1O14929 419 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 SCAMP2O15127 329 aaKnown RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 VILLO15195 856 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 DFNA5O60443 496 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 SCN2BO60939 215 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 LAMP1P11279 417 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 POLR2CP19387 275 aaPredicted RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 GSTM2P28161 218 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 TPP2P29144 1249 aaPredicted RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 BSGP35613 385 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 AHRP35869 848 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 CSNK1EP49674 416 aaKnown RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 GSK3BP49841 420 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 ATXN3P54252 364 aaPredicted RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 WNT3P56703 355 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 LIPEQ05469 1076 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 SLC34A1Q06495 639 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 SIGLEC14Q08ET2 396 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 ZIC1Q15915 447 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 RUNDC3AQ59EK9 446 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 WDR45BQ5MNZ6 344 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 LRIF1Q5T3J3 769 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 CPTPQ5TA50 214 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 TSSK4Q6SA08 328 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 TMEM26Q6ZUK4 368 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 PAGE2Q7Z2X7 111 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 PAQR7Q86WK9 346 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 GKN2Q86XP6 184 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 RBM12BQ8IXT5 1001 aaKnown RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 BHLHE22Q8NFJ8 381 aaPredicted RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 OR8J3Q8NGG0 315 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 LMX1AQ8TE12 382 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 PYDC1Q8WXC3 89 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 RGMAQ96B86 450 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 COQ8BQ96D53 544 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 ANKRD27Q96NW4 1050 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 CENPKQ9BS16 269 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 SORBS1Q9BX66 1292 aaKnown RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 ZNF717Q9BY31 904 aaPredicted RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 PAIP1Q9H074 479 aaKnown RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 REEP4Q9H6H4 257 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 ACTR10Q9NZ32 417 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 SPASTQ9UBP0 616 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 ATP6V1HQ9UI12 483 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 EXO1Q9UQ84 846 aaKnown RBP12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 PCDHGA2Q9Y5H1 932 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 ENTPD2Q9Y5L3 495 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 AP1M2Q9Y6Q5 423 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 LRP4O75096 1905 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 COL6A3P12111 3177 aa12.71□□□□□ -0.37
CEACAM1-206ENST00000403136 LRIT2A6NDA9 550 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 YY2O15391 372 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 TNFSF14O43557 240 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 SERPIND1P05546 499 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 PIM1P11309 404 aaPredicted RBP12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 ANPEPP15144 967 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 UGT2B7P16662 529 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 HPCAL1P37235 193 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 TRPC1P48995 793 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 HNRNPFP52597 415 aaKnown RBP12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 TAS2R50P59544 299 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 HNRNPKP61978 463 aaKnown RBP eCLIP12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 HHEXQ03014 270 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 C2orf80Q0P641 193 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 BNIP2Q12982 314 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 TMEM35AQ53FP2 167 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 CCNYL2Q5T2Q4 361 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 FAM71E1Q6IPT2 247 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 CAMKMTQ7Z624 323 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 ANKRD46Q86W74 232 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 MSRB3Q8IXL7 192 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 TMEM132CQ8N3T6 1108 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 MFSD9Q8NBP5 474 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 TRPV3Q8NET8 790 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 OR10G6Q8NH81 332 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 QRFPRQ96P65 431 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 SH3GL1Q99961 368 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 INPP5KQ9BT40 448 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 DUSP26Q9BV47 211 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 ALG2Q9H553 416 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 MYNNQ9NPC7 610 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 HRASLS2Q9NWW9 162 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 FAM120CQ9NX05 1096 aaKnown RBP12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 SLC25A37Q9NYZ2 338 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 NEUROG3Q9Y4Z2 214 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 PCDHB14Q9Y5E9 798 aa12.71□□□□□ -0.38
CEACAM1-206ENST00000403136 TRBV5-3A0A0A0MS03 114 aa12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 PRSS51A0A1B0GVH4 220 aa12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 GSAPA4D1B5 854 aa12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 B4DGG1 531 aa12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 RTCAO00442 366 aaKnown RBP12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 BCAT2O15382 392 aaPredicted RBP12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 CAPN5O15484 640 aaPredicted RBP12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 NDUFS4O43181 175 aa12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 ZW10O43264 779 aa12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 DNAJA2O60884 412 aa12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 STAMBPO95630 424 aa12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 B3GALT4O96024 378 aa12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 HOXB3P14651 431 aaPredicted RBP12.7□□□□□ -0.38
CEACAM1-206ENST00000403136 FNTBP49356 437 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms