RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 RGS1Q08116 209 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TRAF3Q13114 568 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 DNASE1L3Q13609 305 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 MPP2Q14168 576 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 PCLAFQ15004 111 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 CPSF6Q16630 551 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 NDUFA9Q16795 377 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TOR1AIP1Q5JTV8 583 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 FAM219BQ5XKK7 198 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 PRSS41Q7RTY9 318 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 MILR1Q7Z6M3 343 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 LAS2Q8IYD9 372 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 L3MBTL4Q8NA19 623 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TTLQ8NG68 377 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 OR7G3Q8NG95 312 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 OR4F6Q8NGB9 312 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 OR9A4Q8NGU2 314 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 COL26A1Q96A83 441 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 AICDAQ9GZX7 198 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 STMN4Q9H169 189 aaPredicted RBP16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 RHBGQ9H310 441 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 GSTO2Q9H4Y5 243 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ZNF304Q9HCX3 659 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 PRM3Q9NNZ6 103 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 SSU72Q9NP77 194 aaKnown RBP16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 KCNK9Q9NPC2 374 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 IFT80Q9P2H3 777 aaPredicted RBP16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 MID2Q9UJV3 735 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ACTL7BQ9Y614 415 aa16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 MRPS18BQ9Y676 258 aaKnown RBP16.34■□□□□ 0.21
PTCHD3P3-201ENST00000403073 UQCRHLA0A096LP55 91 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 TBX6O95947 436 aaPredicted RBP16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 B3GALT4O96024 378 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 OTCP00480 354 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 UQCRHP07919 91 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 SERPINA6P08185 405 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 ZNF888P0CJ79 500 aaPredicted RBP16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 CCR10P46092 362 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 RAB8AP61006 207 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 MAGOHP61326 146 aaKnown RBP16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 FAM53BQ14153 422 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 ZRSR2Q15696 482 aaKnown RBP16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 FAM69BQ5VUD6 431 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 BROXQ5VW32 411 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 PRMT9Q6P2P2 845 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 FAM198BQ6UWH4 519 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 COX15Q7KZN9 410 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 SYVN1Q86TM6 617 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 RNF175Q8N4F7 328 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 UBE2E3Q969T4 207 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 ARL8AQ96BM9 186 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 MTFMTQ96DP5 389 aaKnown RBP16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 MMABQ96EY8 250 aaPredicted RBP16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 MECRQ9BV79 373 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 SLC6A16Q9GZN6 736 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 DRC3Q9H069 523 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 ZNF225Q9UK10 706 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 FARSAQ9Y285 508 aaKnown RBP16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 SNRNP200O75643 2136 aaKnown RBP16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 CHD8Q9HCK8 2581 aa16.33■□□□□ 0.2
PTCHD3P3-201ENST00000403073 LRIT2A6NDA9 550 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 C21orf140B9A014 251 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 H0YIV9 168 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 SGK494L7N484 410 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 FFAR3O14843 346 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 GPR42O15529 346 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 TRIM13O60858 407 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 CLEC3AO75596 197 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 OR4F21O95013 312 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 ONECUT2O95948 504 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 IL1RNP18510 177 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 GSTM2P28161 218 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 HNRNPH1P31943 449 aaKnown RBP16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 ETV4P43268 484 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 NEK2P51955 445 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 FOXL2P58012 376 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 RPS18P62269 152 aaKnown RBP16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 RPS15P62841 145 aaKnown RBP16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 DDX39BQ13838 428 aaKnown RBP16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 SDK2Q58EX2 2172 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 CFAP157Q5JU67 520 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 LIPMQ5VYY2 423 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 LETMD1Q6P1Q0 360 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 CCDC81Q6ZN84 652 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 PDSS2Q86YH6 399 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 SHISA5Q8N114 240 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 ENDOVQ8N8Q3 282 aaKnown RBP16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 UTP15Q8TED0 518 aaKnown RBP16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 ZNF473Q8WTR7 871 aaKnown RBP16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 TLCD1Q96CP7 247 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 SEC16BQ96JE7 1060 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 YIPF2Q9BWQ6 316 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 GPR87Q9BY21 358 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 VIPAS39Q9H9C1 493 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 CPNE5Q9HCH3 593 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 ANKHQ9HCJ1 492 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 GPN3Q9UHW5 284 aaPredicted RBP16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 CDC14AQ9UNH5 594 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 NAALAD2Q9Y3Q0 740 aa16.32■□□□□ 0.2
PTCHD3P3-201ENST00000403073 PCDHGA11Q9Y5H2 935 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms