RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 MRPL57Q9BQC6 102 aaKnown RBP18.22■□□□□ 0.51
RTN4-207ENST00000402434 OPTCQ9UBM4 332 aa18.22■□□□□ 0.51
RTN4-207ENST00000402434 TRPC4Q9UBN4 977 aa18.22■□□□□ 0.51
RTN4-207ENST00000402434 SCN3AQ9NY46 2000 aa18.22■□□□□ 0.51
RTN4-207ENST00000402434 WFS1O76024 890 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 SERPINA6P08185 405 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 CD22P20273 847 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 GSTM2P28161 218 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 OTX2P32243 289 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 HSD17B3P37058 310 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 KLC1Q07866 573 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 RGS1Q08116 209 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 HERC3Q15034 1050 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 PCBP2Q15366 365 aaKnown RBP eCLIP18.21■□□□□ 0.519e-21■■□□□ 12.6
RTN4-207ENST00000402434 ERCC6LQ2NKX8 1250 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 VWA2Q5GFL6 755 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 XKR6Q5GH73 641 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 PPP1R32Q7Z5V6 425 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 LCA5Q86VQ0 697 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 KRT78Q8N1N4 520 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 AENQ8WTP8 325 aaKnown RBP18.21■□□□□ 0.51
RTN4-207ENST00000402434 MIEF2Q96C03 454 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 EFCAB11Q9BUY7 163 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 SEMA4CQ9C0C4 833 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 SLC6A16Q9GZN6 736 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 ANKHQ9HCJ1 492 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 MKKSQ9NPJ1 570 aaPredicted RBP18.21■□□□□ 0.51
RTN4-207ENST00000402434 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.21■□□□□ 0.51
RTN4-207ENST00000402434 TMCO1Q9UM00 188 aa18.21■□□□□ 0.51
RTN4-207ENST00000402434 TNPO3Q9Y5L0 923 aaKnown RBP18.21■□□□□ 0.51
RTN4-207ENST00000402434 V9GYY5 206 aaPredicted RBP18.21■□□□□ 0.51
RTN4-207ENST00000402434 EPB42P16452 691 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 IL1RNP18510 177 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 CHIT1Q13231 466 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 ATP1A4Q13733 1029 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 EMBQ6PCB8 327 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 SHISA6Q6ZSJ9 500 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 MED25Q71SY5 747 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 PDSS2Q86YH6 399 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 TMEM102Q8N9M5 508 aaPredicted RBP18.2■□□□□ 0.5
RTN4-207ENST00000402434 ZCCHC10Q8TBK6 192 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 ING2Q9H160 280 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 MRPL46Q9H2W6 279 aaKnown RBP18.2■□□□□ 0.5
RTN4-207ENST00000402434 SOX17Q9H6I2 414 aaPredicted RBP18.2■□□□□ 0.5
RTN4-207ENST00000402434 SEMA3GQ9NS98 782 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 C14orf105Q9NVL8 296 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 XPR1Q9UBH6 696 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 TBK1Q9UHD2 729 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 ZNF490Q9ULM2 529 aaPredicted RBP18.2■□□□□ 0.5
RTN4-207ENST00000402434 PCSK5Q92824 1860 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 SERPIND1P05546 499 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 SBK3P0C264 359 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 SMIM10L1P0DMW3 83 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 ALOX12P18054 663 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 IRF8Q02556 426 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 KCNAB2Q13303 367 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 LAPTM5Q13571 262 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 NIPAL1Q6NVV3 410 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 LAPTM4BQ86VI4 370 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.2■□□□□ 0.51e-6■■■■■ 116
RTN4-207ENST00000402434 TEX9Q8N6V9 391 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 UTP15Q8TED0 518 aaKnown RBP18.2■□□□□ 0.5
RTN4-207ENST00000402434 SMIM10Q96HG1 83 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 SCYL1Q96KG9 808 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 RHBGQ9H310 441 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 CPSF2Q9P2I0 782 aaKnown RBP18.2■□□□□ 0.5
RTN4-207ENST00000402434 NAALAD2Q9Y3Q0 740 aa18.2■□□□□ 0.5
RTN4-207ENST00000402434 URADA6NGE7 173 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 LRRC14BA6NHZ5 514 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 ARGFXA6NJG6 315 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 STX16-NPEPL1H3BU86 382 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 E2F3O00716 465 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 STX16O14662 325 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 GALR3O60755 368 aaPredicted RBP18.19■□□□□ 0.5
RTN4-207ENST00000402434 CLEC3AO75596 197 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 KLHL18O94889 574 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 IGHEP01854 428 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 RRADP55042 308 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 MAT1AQ00266 395 aaKnown RBP18.19■□□□□ 0.5
RTN4-207ENST00000402434 SYT16Q17RD7 645 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 PAGE2BQ5JRK9 111 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 CPZQ66K79 652 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 SH2D5Q6ZV89 423 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 ABHD13Q7L211 337 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 VN1R5Q7Z5H4 357 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 ZC3H7AQ8IWR0 971 aaKnown RBP18.19■□□□□ 0.5
RTN4-207ENST00000402434 CAVIN3Q969G5 261 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 CRB3Q9BUF7 120 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 TRIM55Q9BYV6 548 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 P4HTMQ9NXG6 502 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 HS3ST3B1Q9Y662 390 aa18.19■□□□□ 0.5
RTN4-207ENST00000402434 BOD1L1Q8NFC6 3051 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 SGK494L7N484 410 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 AGPSO00116 658 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 PEX12O00623 359 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 FFAR3O14843 346 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 GPR42O15529 346 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 SIX3O95343 332 aaPredicted RBP18.18■□□□□ 0.5
RTN4-207ENST00000402434 BMP10O95393 424 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 TBX6O95947 436 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms