RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ICKQ9UPZ9 632 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ALPK3Q96L96 1907 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PRRC2BQ5JSZ5 2229 aaKnown RBP17.02■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TCF20Q9UGU0 1960 aaKnown RBP17.02■□□□□ 0.31
HLA-DQB1-204ENST00000399084 NOBOXO60393 691 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SEC24DO94855 1032 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 IFNA14P01570 189 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 FURINP09958 794 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TRIM23P36406 574 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SKIV2LQ15477 1246 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CST6Q15828 149 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 BROXQ5VW32 411 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TRIM40Q6P9F5 258 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CRTC3Q6UUV7 619 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ARMCX6Q7L4S7 300 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PAGE2Q7Z2X7 111 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CLECL1Q8IZS7 167 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ABHD11Q8NFV4 315 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 C16orf78Q8WTQ4 265 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ELSPBP1Q96BH3 223 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 MPP4Q96JB8 637 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 NPLQ9BXD5 320 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TRIT1Q9H3H1 467 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TMEM38AQ9H6F2 299 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 BTBD3Q9Y2F9 522 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 STON1Q9Y6Q2 735 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 LOC100130705A0A1B0GUX0 176 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SUV39H1O43463 412 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 KRT75O95678 551 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ZNF682O95780 498 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 NELFEP18615 380 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 NUP107P57740 925 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 GRSF1Q12849 480 aaKnown RBP eCLIP17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SLC14A1Q13336 389 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SPIDRQ14159 915 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ITPRIPL2Q3MIP1 535 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 LRRC23Q53EV4 343 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ISLR2Q6UXK2 745 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 OFCC1Q8IZS5 231 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 OR52N2Q8NGI0 321 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 OR4A15Q8NGL6 344 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CDC26Q8NHZ8 85 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 DTNBP1Q96EV8 351 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 RAB11FIP5Q9BXF6 653 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 FAF1Q9UNN5 650 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PADI2Q9Y2J8 665 aa17.01■□□□□ 0.31
HLA-DQB1-204ENST00000399084 A0A1B0GTW7 788 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 FKBP9O95302 570 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CPNE6O95741 557 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CCDC159P0C7I6 412 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 DRD3P35462 400 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CDH15P55291 814 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TPD52P55327 224 aaPredicted RBP17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 C2orf80Q0P641 193 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 KCNAB2Q13303 367 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 KEAP1Q14145 624 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 WSCD2Q2TBF2 565 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 C6orf141Q5SZD1 244 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 AGBL4Q5VU57 503 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CCDC80Q76M96 950 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CHPFQ8IZ52 775 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PIK3C3Q8NEB9 887 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 GPR156Q8NFN8 814 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 LZICQ8WZA0 190 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 MBOAT4Q96T53 435 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 DOK1Q99704 481 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 DOHHQ9BU89 302 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 C1QTNF7Q9BXJ2 289 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 MCOLN1Q9GZU1 580 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SMURF2Q9HAU4 748 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PHPT1Q9NRX4 125 aaPredicted RBP17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TAS2R9Q9NYW1 312 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ERVK-11Q9UQG0 969 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 MYO7AQ13402 2215 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PCM1Q15154 2024 aa17■□□□□ 0.31
HLA-DQB1-204ENST00000399084 IGLON5A6NGN9 336 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ANKDD1BA6NHY2 528 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 YY2O15391 372 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 HS6ST1O60243 411 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 MRPS14O60783 128 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ABCB7O75027 752 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CLIC3O95833 236 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TGFB1P01137 390 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CRHBPP24387 322 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 GSTM2P28161 218 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CCR8P51685 355 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ITGA1P56199 1179 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CXCR4P61073 352 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PLCL1Q15111 1095 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ZNF630Q2M218 657 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ZIK1Q3SY52 487 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 DEPDC1Q5TB30 811 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ZNF691Q5VV52 312 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 FAM83HQ6ZRV2 1179 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SLC9B2Q86UD5 537 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 HORMAD1Q86X24 394 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 OR4K1Q8NGD4 311 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 FBLIM1Q8WUP2 373 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ZNF566Q969W8 418 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ZNF347Q96SE7 839 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms