RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 RNF208Q9H0X6 261 aa12.62□□□□□ -0.39
PRAME-201ENST00000398741 DSN1Q9H410 356 aa12.62□□□□□ -0.39
PRAME-201ENST00000398741 SPG21Q9NZD8 308 aa12.62□□□□□ -0.39
PRAME-201ENST00000398741 OSGIN1Q9UJX0 560 aa12.62□□□□□ -0.39
PRAME-201ENST00000398741 TTC34A8MYJ7 566 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 TSPAN6O43657 245 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 SGTAO43765 313 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 PCDH7O60245 1069 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 OPN1SWP03999 348 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 TIA1P31483 386 aaKnown RBP eCLIP12.61□□□□□ -0.396e-12■■■■■ 39.4
PRAME-201ENST00000398741 GGT2P36268 569 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 TGFBR1P36897 503 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 PREPP48147 710 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 EIF2B2P49770 351 aaKnown RBP12.61□□□□□ -0.39
PRAME-201ENST00000398741 CRYBA2P53672 197 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 SPIBQ01892 262 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRAME-201ENST00000398741 DNASE1L3Q13609 305 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 MAPK11Q15759 364 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 ZNF284Q2VY69 593 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 CCSMST1Q4G0I0 132 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 PLEKHG7Q6ZR37 379 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 CAMKMTQ7Z624 323 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 TRAM1L1Q8N609 369 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 OR7G3Q8NG95 312 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 HUS1BQ8NHY5 278 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 FOXJ1Q92949 421 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 C11orf24Q96F05 449 aaPredicted RBP12.61□□□□□ -0.39
PRAME-201ENST00000398741 FOPNLQ96NB1 174 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 OR4K3Q96R72 315 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 SIGLEC11Q96RL6 698 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 FEVQ99581 238 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 RIOK2Q9BVS4 552 aaKnown RBP12.61□□□□□ -0.39
PRAME-201ENST00000398741 BTBD2Q9BX70 525 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 OGDHLQ9ULD0 1010 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 LYVE1Q9Y5Y7 322 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 NEDD8-MDP1E9PL57 170 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 RNASET2O00584 256 aaKnown RBP12.61□□□□□ -0.39
PRAME-201ENST00000398741 ATG13O75143 517 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 RFPL2O75678 378 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 PABPC1P11940 636 aaKnown RBP12.61□□□□□ -0.39
PRAME-201ENST00000398741 TGM1P22735 817 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 DCDC1P59894 354 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 RPS3AP61247 264 aaKnown RBP12.61□□□□□ -0.39
PRAME-201ENST00000398741 RPS13P62277 151 aaKnown RBP12.61□□□□□ -0.39
PRAME-201ENST00000398741 TUBA1BP68363 451 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 TBCEQ15813 527 aaPredicted RBP12.61□□□□□ -0.39
PRAME-201ENST00000398741 TIGD6Q17RP2 521 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 IFI44LQ53G44 452 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 TUBA1AQ71U36 451 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 TMPRSS11BQ86T26 416 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 DDX53Q86TM3 631 aaKnown RBP12.61□□□□□ -0.39
PRAME-201ENST00000398741 FAM124AQ86V42 546 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 RASGRP3Q8IV61 690 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 PSMA8Q8TAA3 256 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 CHTF18Q8WVB6 975 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 PROX1Q92786 737 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 COQ8BQ96D53 544 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 REPS1Q96D71 796 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 ZSCAN5AQ9BUG6 496 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 ZBTB20Q9HC78 741 aaPredicted RBP12.61□□□□□ -0.39
PRAME-201ENST00000398741 NDUFAF4Q9P032 175 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 MAFFQ9ULX9 164 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 KCNE2Q9Y6J6 123 aa12.61□□□□□ -0.39
PRAME-201ENST00000398741 ZNF197O14709 1029 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 KDM1AO60341 852 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 CNOT3O75175 753 aaKnown RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 SLC16A8O95907 504 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 ANXA8P13928 327 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 TNFRSF1BP20333 461 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 XPAP23025 273 aaPredicted RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 PTX3P26022 381 aaPredicted RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 IMPA1P29218 277 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 C21orf33P30042 268 aaPredicted RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 LIPAP38571 399 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 MAGEA8P43361 318 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 IDH2P48735 452 aaKnown RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 PPP5CP53041 499 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 CASP9P55211 416 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 CDH12P55289 794 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 FPGSQ05932 587 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 TSTA3Q13630 321 aaPredicted RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 GCNT6Q5T4J0 391 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 ASTLQ6HA08 431 aaPredicted RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 MED27Q6P2C8 311 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 TMC8Q8IU68 726 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 SLC5A8Q8N695 610 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 OR2A12Q8NGT7 310 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 OR52J3Q8NH60 311 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 CXorf40BQ96DE9 158 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 PKP4Q99569 1192 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 BHLHE41Q9C0J9 482 aaPredicted RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 AMBNQ9NP70 447 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 RAD18Q9NS91 495 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 PLCXD1Q9NUJ7 323 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 SPASTQ9UBP0 616 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 PSORS1C1Q9UIG5 152 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 POFUT2Q9Y2G5 429 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 PLXNB3Q9ULL4 1909 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms