RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 EID3Q8N140 333 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 MSANTD3Q96H12 275 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 ZNF578Q96N58 590 aaPredicted RBP4.86□□□□□ -1.63
SSR1-202ENST00000397511 CASD1Q96PB1 797 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 OR52E6Q96RD3 313 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 RHNO1Q9BSD3 238 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 INPP5KQ9BT40 448 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 DPY30Q9C005 99 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 PPA2Q9H2U2 334 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 NIPAL2Q9H841 368 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 ACTR8Q9H981 624 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 IL26Q9NPH9 171 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 TRPM5Q9NZQ8 1165 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 NUFIP1Q9UHK0 495 aaKnown RBP4.86□□□□□ -1.63
SSR1-202ENST00000397511 SSUH2Q9Y2M2 353 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 KLHL20Q9Y2M5 609 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 ORC6Q9Y5N6 252 aa4.86□□□□□ -1.63
SSR1-202ENST00000397511 A0A1W2PQ45 241 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 A0A1W2PQY0 241 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 A0A1W2PRG6 482 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 FAM234BA2RU67 622 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 LINC00862A6NCI5 91 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CCDC182A6NF36 153 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MITFO75030 526 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 PGLSO95336 258 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 FADS2O95864 444 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 FTH1P02794 183 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CKMP06732 381 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MSH3P20585 1137 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 HNF1BP35680 557 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CTSOP43234 321 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 IL5RAQ01344 420 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 DBPQ10586 325 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 SLAMF1Q13291 335 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 KCNAB2Q13303 367 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TNK1Q13470 666 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 EFR3AQ14156 821 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CHRNA6Q15825 494 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CES5AQ6NT32 575 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 FAM180BQ6P0A1 224 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ANGPTL8Q6UXH0 198 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.85□□□□□ -1.633e-9■■■■■ 64.7
SSR1-202ENST00000397511 SPATA19Q7Z5L4 167 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TMEM179BQ7Z7N9 219 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 KIF18BQ86Y91 864 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 SETD9Q8NE22 299 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CNIH3Q8TBE1 160 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 RAET1EQ8TD07 263 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 BPIFB1Q8TDL5 484 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 SLC13A3Q8WWT9 602 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ELMO1Q92556 727 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 KCNJ9Q92806 393 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TESCQ96BS2 214 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ASIC4Q96FT7 647 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ZNF583Q96ND8 569 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MBOAT4Q96T53 435 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 BARD1Q99728 777 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 RBM4BQ9BQ04 359 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 RBM4Q9BWF3 364 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 BEX2Q9BXY8 128 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 PRRG3Q9BZD7 231 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ZBTB20Q9HC78 741 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 CCNB1IP1Q9NPC3 277 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TMEM161AQ9NX61 479 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ARL15Q9NXU5 204 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 IL17CQ9P0M4 197 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 C3orf18Q9UK00 162 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 DLGAP4Q9Y2H0 992 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 LYVE1Q9Y5Y7 322 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 FNDC1Q4ZHG4 1894 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 LAMA1P25391 3075 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 LOC100130705A0A1B0GUX0 176 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 FAM92AA1XBS5 289 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 OR6C75A6NL08 312 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 OR2AG2A6NM03 316 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 H3BQ06 376 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 TFECO14948 347 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 TULP3O75386 442 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 SERPINA1P01009 418 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 F11P03951 625 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 PGRP06401 933 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 PFKLP17858 780 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CSTF2P33240 577 aaKnown RBP eCLIP4.85□□□□□ -1.63
SSR1-202ENST00000397511 RYKP34925 604 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 SOX6P35712 828 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TGFBR1P36897 503 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CDKN2CP42773 168 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 PTGER3P43115 390 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MAGEA11P43364 429 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 SOX9P48436 509 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 GZMKP49863 264 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ISL1P61371 349 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 OLR1P78380 273 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 EMX2Q04743 252 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 RING1Q06587 406 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 BAMBIQ13145 260 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CDK5R2Q13319 367 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 SLC14A1Q13336 389 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MFSD13AQ14CX5 517 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 FAM98BQ52LJ0 330 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms