RNA–Protein interactions for RNA: ENST00000396401.7

TCEA1-201, Transcript of transcription elongation factor A1, humanhuman

TSL 1 (best) BASIC

Gene TCEA1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-201ENST00000396401 MACC1Q6ZN28 852 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 VASH1Q7L8A9 365 aaPredicted RBP17.08■□□□□ 0.32
TCEA1-201ENST00000396401 OTOP2Q7RTS6 562 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 ZNF605Q86T29 641 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 SLC44A2Q8IWA5 706 aaPredicted RBP17.08■□□□□ 0.32
TCEA1-201ENST00000396401 BBS7Q8IWZ6 715 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 MMP21Q8N119 569 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 SYNPOQ8N3V7 929 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 UBTD2Q8WUN7 234 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 AUTS2Q8WXX7 1259 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 PITX2Q99697 317 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 HTATIP2Q9BUP3 242 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 CNPPD1Q9BV87 410 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 SP140LQ9H930 580 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 C11orf16Q9NQ32 467 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 IMPAD1Q9NX62 359 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 SPATA7Q9P0W8 599 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 DUSP12Q9UNI6 340 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 UGT2A1Q9Y4X1 527 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 PCDHGA3Q9Y5H0 932 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 DNMT3AQ9Y6K1 912 aaPredicted RBP17.08■□□□□ 0.32
TCEA1-201ENST00000396401 SPEGQ15772 3267 aa17.08■□□□□ 0.32
TCEA1-201ENST00000396401 TMEM189-UBE2V1I3L0A0 370 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 EOMESO95936 686 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 PFN3P60673 137 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 NKX3-2P78367 333 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 ACSM2AQ08AH3 577 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 TCTN1Q2MV58 587 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 ACSM2BQ68CK6 577 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 IPCEF1Q8WWN9 437 aaPredicted RBP17.07■□□□□ 0.32
TCEA1-201ENST00000396401 KCTD5Q9NXV2 234 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 CLEC2DQ9UHP7 191 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 ERVW-1Q9UQF0 538 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 OR51B4Q9Y5P0 310 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 HSPE1-MOB4S4R3N1 261 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 FAM47E-STBD1D6RA91 191 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 LOC110117498-PIK3R3F6TDL0 507 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 DYRK3O43781 588 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 IL1RNP18510 177 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 PRPS1L1P21108 318 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 CD70P32970 193 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 MEF2AQ02078 507 aaPredicted RBP17.07■□□□□ 0.32
TCEA1-201ENST00000396401 PTSQ03393 145 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 PRKCZQ05513 592 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 CDC20Q12834 499 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 RGNQ15493 299 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 TRAF7Q6Q0C0 670 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 NFKBIDQ8NI38 313 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 BCL7BQ9BQE9 202 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.07■□□□□ 0.322e-8■■■□□ 18.8
TCEA1-201ENST00000396401 SMG9Q9H0W8 520 aaKnown RBP17.07■□□□□ 0.32
TCEA1-201ENST00000396401 TRPM5Q9NZQ8 1165 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 VPS29Q9UBQ0 182 aa17.07■□□□□ 0.32
TCEA1-201ENST00000396401 HELZP42694 1942 aaKnown RBP17.07■□□□□ 0.32
TCEA1-201ENST00000396401 TRBV5-4A0A0C4DH59 114 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 HAT1O14929 419 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 FHP07954 510 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 ANXA4P09525 319 aaPredicted RBP17.06■□□□□ 0.32
TCEA1-201ENST00000396401 GJA1P17302 382 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 NAE1Q13564 534 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 DOC2AQ14183 400 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 ZNF181Q2M3W8 571 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 C10orf62Q5T681 223 aaPredicted RBP17.06■□□□□ 0.32
TCEA1-201ENST00000396401 NEK10Q6ZWH5 1172 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 HMGN2P46Q86SG4 172 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 OR4A15Q8NGL6 344 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 ALG14Q96F25 216 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 TRMT61AQ96FX7 289 aaKnown RBP17.06■□□□□ 0.32
TCEA1-201ENST00000396401 CEP295NLQ96MC4 621 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 TTYH2Q9BSA4 534 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 MUTYHQ9UIF7 546 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 PCDHB11Q9Y5F2 797 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 TBKBP1A7MCY6 615 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 SEPT4O43236 478 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 ZNF821O75541 412 aaPredicted RBP17.06■□□□□ 0.32
TCEA1-201ENST00000396401 NSG1P42857 185 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 RPS26P62854 115 aaKnown RBP17.06■□□□□ 0.32
TCEA1-201ENST00000396401 HBA1P69905 142 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 MTAPQ13126 283 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 TBCEQ15813 527 aaPredicted RBP17.06■□□□□ 0.32
TCEA1-201ENST00000396401 PAQR6Q6TCH4 344 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 TMCO2Q7Z6W1 182 aaPredicted RBP17.06■□□□□ 0.32
TCEA1-201ENST00000396401 CELF5Q8N6W0 485 aaKnown RBP17.06■□□□□ 0.32
TCEA1-201ENST00000396401 IL17RDQ8NFM7 739 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 PRRG3Q9BZD7 231 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 CEP44Q9C0F1 390 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 MMP28Q9H239 520 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 TIGARQ9NQ88 270 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 DNAJC11Q9NVH1 559 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 TMA7Q9Y2S6 64 aaKnown RBP17.06■□□□□ 0.32
TCEA1-201ENST00000396401 PCDHGA2Q9Y5H1 932 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 N6AMT1Q9Y5N5 214 aa17.06■□□□□ 0.32
TCEA1-201ENST00000396401 APOL3O95236 402 aa17.05■□□□□ 0.32
TCEA1-201ENST00000396401 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
TCEA1-201ENST00000396401 PBLDP30039 288 aaPredicted RBP17.05■□□□□ 0.32
TCEA1-201ENST00000396401 HNRNPFP52597 415 aaKnown RBP17.05■□□□□ 0.32
TCEA1-201ENST00000396401 UGT2B15P54855 530 aa17.05■□□□□ 0.32
TCEA1-201ENST00000396401 COL9A2Q14055 689 aaPredicted RBP17.05■□□□□ 0.32
TCEA1-201ENST00000396401 SPANXN2Q5MJ10 180 aa17.05■□□□□ 0.32
TCEA1-201ENST00000396401 CPTPQ5TA50 214 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms