RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SPASTQ9UBP0 616 aa12.12□□□□□ -0.47
SLC28A1-203ENST00000394573 ENTPD4Q9Y227 616 aa12.12□□□□□ -0.47
SLC28A1-203ENST00000394573 TNS2Q63HR2 1409 aa12.12□□□□□ -0.47
SLC28A1-203ENST00000394573 CLCA1A8K7I4 914 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 LRRTM2O43300 516 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 PROM1O43490 865 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 PAGE1O75459 146 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 MICAL2O94851 1124 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 FPR3P25089 353 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 IL18Q14116 193 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 TAF1CQ15572 869 aaPredicted RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 AKIRIN2Q53H80 203 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 BEND4Q6ZU67 534 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 CIR1Q86X95 450 aaPredicted RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 SIAH1Q8IUQ4 282 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 ZDHHC21Q8IVQ6 265 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 SH3RF2Q8TEC5 729 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 FBXO17Q96EF6 278 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 ADAT1Q9BUB4 502 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 MED18Q9BUE0 208 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 ELAC1Q9H777 363 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 PURGQ9UJV8 347 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 USP21Q9UK80 565 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 EXO1Q9UQ84 846 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 PCDHGA6Q9Y5G7 932 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 KLK4Q9Y5K2 254 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 SYNJ2BP-COX16A0A087WUM0 186 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 MTMR11A4FU01 709 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 K7ERI5 159 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 S100A9P06702 114 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 ADRB1P08588 477 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 NMBP08949 121 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 ITGB5P18084 799 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 MAPK1P28482 360 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 SLC1A2P43004 574 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 DCDC1P59894 354 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 NPRL3Q12980 569 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 SEC23BQ15437 767 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 GTDC1Q4AE62 458 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 ZNF678Q5SXM1 525 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 CATSPERGQ6ZRH7 1159 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 KDELC2Q7Z4H8 507 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 NIM1KQ8IY84 436 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 BVESQ8NE79 360 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 DUSP18Q8NEJ0 188 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 OR52K2Q8NGK3 314 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 DOT1LQ8TEK3 1739 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 TRMT2BQ96GJ1 504 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 CRELD1Q96HD1 420 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 COL21A1Q96P44 957 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 KCTD15Q96SI1 283 aaPredicted RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 SLC38A3Q99624 504 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 NIF3L1Q9GZT8 377 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 PRDM12Q9H4Q4 367 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 QTRT2Q9H974 415 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 SEMA4BQ9NPR2 832 aaPredicted RBP12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 C14orf105Q9NVL8 296 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 COX16Q9P0S2 106 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 SLC2A6Q9UGQ3 507 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 ASB4Q9Y574 426 aa12.11□□□□□ -0.47
SLC28A1-203ENST00000394573 C19orf81C9J6K1 198 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 PRKRAO75569 313 aaKnown RBP12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 STOMP27105 288 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 ALDH9A1P49189 494 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 DGKEP52429 567 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 ZNF528Q3MIS6 628 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 FAM171A1Q5VUB5 890 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 SLC25A25Q6KCM7 469 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 SHQ1Q6PI26 577 aaKnown RBP12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 CBLN2Q8IUK8 224 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 BMPERQ8N8U9 685 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 UCN3Q969E3 161 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 ZNF707Q96C28 371 aaPredicted RBP12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 MNTQ99583 582 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 ZNF670Q9BS34 389 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 ZNF436Q9C0F3 470 aaPredicted RBP12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 AOC2O75106 756 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 ALPIP09923 528 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 SFTPCP11686 197 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 CXCR3P49682 368 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 CLDN10P78369 228 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 SP4Q02446 784 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 TRAM2Q15035 370 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 NHLRC3Q5JS37 347 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 C10orf111Q8N326 155 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 PTGR2Q8N8N7 351 aaPredicted RBP12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 BOLLQ8N9W6 283 aaKnown RBP12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 C19orf43Q9BQ61 176 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 PTDSS2Q9BVG9 487 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 CHIAQ9BZP6 476 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 SEMA4CQ9C0C4 833 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 SEC14L4Q9UDX3 406 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 KIF25Q9UIL4 384 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 YARS2Q9Y2Z4 477 aaKnown RBP12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 CDH10Q9Y6N8 788 aa12.1□□□□□ -0.47
SLC28A1-203ENST00000394573 QSOX1O00391 747 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 GPR37O15354 613 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 C9P02748 559 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 RPS17P08708 135 aaKnown RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 PRDX3P30048 256 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms