RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 AP1S2P56377 157 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 TARDBPQ13148 414 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 USP30Q70CQ3 517 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 WFDC5Q8TCV5 224 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 MGLLQ99685 303 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 NTMT1Q9BV86 223 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 HDHD2Q9H0R4 259 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 VNN3Q9NY84 501 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 TAS2R16Q9NYV7 291 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 CFAP20Q9Y6A4 193 aaKnown RBP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 DNAJB5O75953 348 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 OXSR1O95747 527 aaPredicted RBP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 PRR35P0CG20 571 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 CLK3P49761 638 aaKnown RBP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 RPS7P62081 194 aaKnown RBP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 CSNK2BP67870 215 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 TUBA1BP68363 451 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 ARSIQ5FYB1 569 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 DCST1Q5T197 706 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 DHRS4L2Q6PKH6 230 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 TUBA1AQ71U36 451 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 TRIM48Q8IWZ4 208 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 Q8N9G6 341 aaPredicted RBP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 SORCS1Q8WY21 1168 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 COL26A1Q96A83 441 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 FAM129BQ96TA1 746 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 DOHHQ9BU89 302 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 MTG2Q9H4K7 406 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 PMF1-BGLAPU3KQ54 211 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 WDR81Q562E7 1941 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 GRXCR2A6NFK2 248 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 TSPAN6O43657 245 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 KIAA0513O60268 411 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 PABPC1P11940 636 aaKnown RBP15.56■□□□□ 0.08
PCDH1-203ENST00000394536 PROX2Q3B8N5 592 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 IRAK1BP1Q5VVH5 260 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 RAB43Q86YS6 212 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 ADAMTS16Q8TE57 1224 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 DNASE1L2Q92874 299 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 NEURL2Q9BR09 285 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 YIPF4Q9BSR8 244 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 POLR2J3Q9H1A7 115 aaKnown RBP15.56■□□□□ 0.08
PCDH1-203ENST00000394536 LHX3Q9UBR4 397 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 PRKAB1Q9Y478 270 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 RFPL2O75678 378 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 SNAPC1Q16533 368 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 ZNF697Q5TEC3 545 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 CCDC80Q76M96 950 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 C2orf15Q8WU43 125 aaKnown RBP15.56■□□□□ 0.08
PCDH1-203ENST00000394536 FNDC11Q9BVV2 318 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 RNF167Q9H6Y7 350 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 CCL16O15467 120 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 AQP9O43315 295 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 TNFRSF21O75509 655 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 SLC16A8O95907 504 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 CD40LGP29965 261 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 MC1RQ01726 317 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 KCNJ8Q15842 424 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 MFSD4BQ5TF39 518 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 ZSWIM9Q86XI8 627 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 MINDY2Q8NBR6 621 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 OR2AG1Q9H205 316 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 TMEM245Q9H330 911 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 ATP6V1HQ9UI12 483 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 POFUT2Q9Y2G5 429 aa15.56■□□□□ 0.08
PCDH1-203ENST00000394536 PCDHGA12O60330 932 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 BCHEP06276 602 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 S100A1P23297 94 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 ATAD3BQ5T9A4 648 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 KLHL17Q6TDP4 642 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 VRK3Q8IV63 474 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 PDLIM5Q96HC4 596 aaKnown RBP15.55■□□□□ 0.08
PCDH1-203ENST00000394536 TRNT1Q96Q11 434 aaKnown RBP15.55■□□□□ 0.08
PCDH1-203ENST00000394536 EQTNQ9NQ60 294 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 IL37Q9NZH6 218 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 COMMD3Q9UBI1 195 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 UPK1AO00322 258 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 AMD1P17707 334 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 CR2P20023 1033 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 PHC1P78364 1004 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 DESI1Q6ICB0 168 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 CXorf57Q6NSI4 855 aaKnown RBP15.55■□□□□ 0.08
PCDH1-203ENST00000394536 CEACAM20Q6UY09 585 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 SPATC1Q76KD6 591 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 ZNF683Q8IZ20 524 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 ZNF614Q8N883 585 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 RHOXF1Q8NHV9 184 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 HUS1BQ8NHY5 278 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 CCDC115Q96NT0 180 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 PPT2Q9UMR5 302 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 CFL2Q9Y281 166 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 CTDSP2O14595 271 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 SCAMP1O15126 338 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 GRM6O15303 877 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 NR2F6P10588 404 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 JUPP14923 745 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 RAB25P57735 213 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 TCEANCQ8N8B7 351 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 CHST14Q8NCH0 376 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms