RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RPA4Q13156 261 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 APOFQ13790 326 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.46□□□□□ -0.14e-10■■■■□ 24.7
GPC3-202ENST00000394299 GALNT18Q6P9A2 607 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 LCTLQ6UWM7 567 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 NAGSQ8N159 534 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 TSPAN14Q8NG11 270 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 SETD7Q8WTS6 366 aaKnown RBP14.46□□□□□ -0.1
GPC3-202ENST00000394299 JPH3Q8WXH2 748 aaPredicted RBP14.46□□□□□ -0.1
GPC3-202ENST00000394299 TMIGD2Q96BF3 282 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 PYURFQ96I23 114 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 BARD1Q99728 777 aaKnown RBP14.46□□□□□ -0.1
GPC3-202ENST00000394299 C1QTNF2Q9BXJ5 285 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 VNN3Q9NY84 501 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 SPASTQ9UBP0 616 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 ACSL6Q9UKU0 697 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 FZD4Q9ULV1 537 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 GPSM3Q9Y4H4 160 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 PCDHB11Q9Y5F2 797 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 CKAP5Q14008 2032 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 C1orf226A1L170 272 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 C6orf47O95873 294 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 PABPC4LP0CB38 370 aaKnown RBP14.45□□□□□ -0.1
GPC3-202ENST00000394299 ASMTP46597 345 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 RPL5P46777 297 aaKnown RBP14.45□□□□□ -0.1
GPC3-202ENST00000394299 ZNF763Q0D2J5 394 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 COL9A2Q14055 689 aaPredicted RBP14.45□□□□□ -0.1
GPC3-202ENST00000394299 VMACQ2NL98 169 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 COX20Q5RI15 118 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 ANGPTL8Q6UXH0 198 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 MSANTD1Q6ZTZ1 278 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 SERPINA11Q86U17 422 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 OR4A15Q8NGL6 344 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 TRAPPC9Q96Q05 1148 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 MRPS26Q9BYN8 205 aaKnown RBP14.45□□□□□ -0.1
GPC3-202ENST00000394299 FAM192AQ9GZU8 254 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 ABCG4Q9H172 646 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 EHD1Q9H4M9 534 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 REEP4Q9H6H4 257 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 PNPLA3Q9NST1 481 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 GPATCH2Q9NW75 528 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 A0A0G2JN53 185 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 POM121BA6NF01 834 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 G3V2T6 193 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 PPM1DO15297 605 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 LCMT2O60294 686 aaKnown RBP14.45□□□□□ -0.1
GPC3-202ENST00000394299 DNTTP04053 509 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 IL3P08700 152 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 MYF6P23409 242 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 TNFRSF4P43489 277 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 YAP1P46937 504 aaKnown RBP14.45□□□□□ -0.1
GPC3-202ENST00000394299 ADPRHP54922 357 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 C21orf58P58505 322 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 RPS21P63220 83 aaKnown RBP14.45□□□□□ -0.1
GPC3-202ENST00000394299 SPESP1Q6UW49 350 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 GPR155Q7Z3F1 870 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 C17orf64Q86WR6 236 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 METTL4Q8N3J2 472 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 OR5AK3PQ8NH89 298 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 RMND5BQ96G75 393 aaPredicted RBP14.45□□□□□ -0.1
GPC3-202ENST00000394299 TSC22D3Q99576 134 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 MACROD1Q9BQ69 325 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 PRDM8Q9NQV8 689 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 PHPT1Q9NRX4 125 aaPredicted RBP14.45□□□□□ -0.1
GPC3-202ENST00000394299 DNAJB9Q9UBS3 223 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 RAPGEFL1Q9UHV5 662 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 ABCG2Q9UNQ0 655 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 MYRFQ9Y2G1 1151 aa14.45□□□□□ -0.1
GPC3-202ENST00000394299 H0Y8X5 98 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 hCG_2039718K7EN88 272 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 ALPLP05186 524 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 FURINP09958 794 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 HOXB2P14652 356 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 CTHP32929 405 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 HPCAL1P37235 193 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 CAPGP40121 348 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 CCR3P51677 355 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 DAG1Q14118 895 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 TMEM259Q4ZIN3 620 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 RBM44Q6ZP01 1051 aaKnown RBP14.44□□□□□ -0.1
GPC3-202ENST00000394299 ZDHHC13Q8IUH4 622 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 APLFQ8IW19 511 aaPredicted RBP14.44□□□□□ -0.1
GPC3-202ENST00000394299 ZFP90Q8TF47 636 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 UCN3Q969E3 161 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 MUS81Q96NY9 551 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 TRIT1Q9H3H1 467 aaKnown RBP14.44□□□□□ -0.1
GPC3-202ENST00000394299 C5AR2Q9P296 337 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 TICRRQ7Z2Z1 1910 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 PLPP1O14494 284 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 PLRG1O43660 514 aaKnown RBP14.44□□□□□ -0.1
GPC3-202ENST00000394299 ERGP11308 486 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 TPP2P29144 1249 aaPredicted RBP14.44□□□□□ -0.1
GPC3-202ENST00000394299 KDELR2P33947 212 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 ALDH3A2P51648 485 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 CRYBA2P53672 197 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 ADARB1P78563 741 aaKnown RBP14.44□□□□□ -0.1
GPC3-202ENST00000394299 FAM71E1Q6IPT2 247 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 TTC33Q6PID6 262 aaPredicted RBP14.44□□□□□ -0.1
GPC3-202ENST00000394299 AMER3Q8N944 861 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 OR52E4Q8NGH9 312 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms