RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 MARCKSL1P49006 195 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 PER3P56645 1201 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 ERVK-16P61578 105 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 KCNJ2P63252 427 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 SP2Q02086 613 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 FIGNL1Q6PIW4 674 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 TTLL10Q6ZVT0 673 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 STK35Q8TDR2 534 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 IRGQQ8WZA9 623 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 SPOCK2Q92563 424 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
CCDC50-201ENST00000392455 OPA3Q9H6K4 179 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 AGO3Q9H9G7 860 aaKnown RBP14.32□□□□□ -0.12
CCDC50-201ENST00000392455 ABRACLQ9P1F3 81 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 GXYLT2A0PJZ3 443 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 CCDC85CA6NKD9 419 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 SIM2Q14190 667 aaPredicted RBP14.32□□□□□ -0.12
CCDC50-201ENST00000392455 GPR149Q86SP6 731 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 HOXB13Q92826 284 aaPredicted RBP14.32□□□□□ -0.12
CCDC50-201ENST00000392455 GRHPRQ9UBQ7 328 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 ANKRD28O15084 1053 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 POP4O95707 220 aaKnown RBP14.32□□□□□ -0.12
CCDC50-201ENST00000392455 ECH1Q13011 328 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 RFTN1Q14699 578 aaPredicted RBP14.32□□□□□ -0.12
CCDC50-201ENST00000392455 CCNJQ5T5M9 372 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 TOP6BLQ8N6T0 577 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 MTG2Q9H4K7 406 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 SRA1Q9HD15 236 aaKnown RBP14.32□□□□□ -0.12
CCDC50-201ENST00000392455 DEC1Q9P2X7 70 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 LOXHD1Q8IVV2 1947 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 A0A0G2JN53 185 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 C2orf78A6NCI8 922 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 SCNN1AP37088 669 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 ESCO2Q56NI9 601 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 CMTM1Q8IZ96 169 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 OR4K17Q8NGC6 315 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 PPTC7Q8NI37 304 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 HAS1Q92839 578 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 UPRTQ96BW1 309 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 GP1BBP13224 206 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 DNASE1L3Q13609 305 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 GSG1LQ6UXU4 331 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 SLC36A4Q6YBV0 504 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 PGAP1Q75T13 922 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 OR52E4Q8NGH9 312 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 OR52J3Q8NH60 311 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 TSSK3Q96PN8 268 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 SPATA31C2B4DYI2 1134 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 GABBR2O75899 941 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 IL33O95760 270 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 SLC5A3P53794 718 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 NRG1Q02297 640 aaPredicted RBP14.32□□□□□ -0.12
CCDC50-201ENST00000392455 HSPB3Q12988 150 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 HMGN3Q15651 99 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 DPY19L3Q6ZPD9 716 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 ANKS1BQ7Z6G8 1248 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 KIDINS220Q9ULH0 1771 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 KLF10Q13118 480 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 CHIT1Q13231 466 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 EIF2B1Q14232 305 aaKnown RBP14.31□□□□□ -0.12
CCDC50-201ENST00000392455 IL23RQ5VWK5 629 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 ANKK1Q8NFD2 765 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 OR5B17Q8NGF7 314 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 GAS2L1Q99501 681 aaPredicted RBP14.31□□□□□ -0.12
CCDC50-201ENST00000392455 EIF2B3Q9NR50 452 aaKnown RBP14.31□□□□□ -0.12
CCDC50-201ENST00000392455 PXDNQ92626 1479 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 GJE1A6NN92 205 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 ALOX15BO15296 676 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 EDF1O60869 148 aaKnown RBP14.31□□□□□ -0.12
CCDC50-201ENST00000392455 RBBP9O75884 186 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 C19orf35Q6ZS72 473 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 KCTD9Q7L273 389 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 MOB1BQ7L9L4 216 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 OR52B2Q96RD2 323 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 PCM1Q15154 2024 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 EFCAB7A8K855 629 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 RFPL1O75677 317 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 CHRNB2P17787 502 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 SLC2A5P22732 501 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 CLRN1P58418 232 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 SH3PXD2AQ5TCZ1 1133 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 SLC8B1Q6J4K2 584 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 TEX19Q8NA77 164 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 PLD4Q96BZ4 506 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 TMEM80Q96HE8 168 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 OSBPL2Q9H1P3 480 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 TLE6Q9H808 572 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 UGT1A9O60656 530 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 UGT1A6P19224 532 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 UGT1A1P22309 533 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 UGT1A4P22310 534 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 CORO1AP31146 461 aaKnown RBP14.31□□□□□ -0.12
CCDC50-201ENST00000392455 TMEM35AQ53FP2 167 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 OR51E2Q9H255 320 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 LHX5Q9H2C1 402 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 UGT1A7Q9HAW7 530 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 UGT1A10Q9HAW8 530 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 UGT1A8Q9HAW9 530 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 UGCGQ16739 394 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 PIGGQ5H8A4 983 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms