RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 MAGEA11P43364 429 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KIR2DS2P43631 304 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KIR2DS4P43632 304 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 MMP13P45452 471 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 MAPK9P45984 424 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CCR10P46092 362 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 BDKRB1P46663 353 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 IER3P46695 156 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLCO1A2P46721 670 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 BRCC3P46736 316 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 RPL27AP46776 148 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 STT3AP46977 705 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 RGRP47804 291 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GABRB2P47870 512 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 OR3A2P47893 321 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 P2RY1P47900 373 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 AVPR1BP47901 424 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNJ1P48048 391 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNJ6P48051 423 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CPA2P48052 419 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CXCL12P48061 93 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC6A12P48065 614 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NPBWR2P48146 333 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GABRA4P48169 554 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TFPI2P48307 235 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ALDH3B2P48448 385 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNJ5P48544 419 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TRAPPC10P48553 1259 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CSNK1DP48730 415 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PIK3CGP48736 1102 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 HSPA7P48741 367 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NR2C2P49116 596 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC11A1P49279 550 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 FMO5P49326 533 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 AMPHP49418 695 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ALDH7A1P49419 539 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 HARS2P49590 506 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PRIM2P49643 509 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CSNK1EP49674 416 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CTCFP49711 727 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CEBPDP49716 269 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 VPS41P49754 854 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 FHITP49789 147 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NT5C2P49902 561 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CAMPP49913 170 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 MTHFSP49914 203 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 LIG4P49917 911 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GDI2P50395 445 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC26A2P50443 739 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SERPINB8P50452 374 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ETV1P50549 477 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 BLKP51451 505 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TPMTP51580 245 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 P2RY4P51582 365 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ALDH3A2P51648 485 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 HSD17B4P51659 736 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CCL11P51671 97 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CCR3P51677 355 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CCR4P51679 360 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SGSHP51688 502 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CLCN3P51790 818 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CLCNKAP51800 687 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 VAMP7P51809 220 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR143P51810 404 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS6KA3P51812 740 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NEK2P51955 445 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NEK3P51956 506 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 UBE2E1P51965 193 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 RND2P52198 227 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KPNA1P52294 538 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC7A2P52569 658 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF138P52744 262 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 EFNA4P52798 201 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 EFNB2P52799 333 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NDST1P52848 882 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NDST2P52849 883 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PDX1P52945 283 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 METAP1P53582 386 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SUCLG1P53597 346 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CRYBA2P53672 197 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ITGA8P53708 1063 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC5A3P53794 718 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 RCAN1P53805 252 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CRISP1P54107 249 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TERF1P54274 439 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PNLIPRP2P54317 469 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 YARSP54577 528 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 HSPA2P54652 639 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NAGLUP54802 743 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GALCP54803 685 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF5P55010 431 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC12A2P55011 1212 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 APOC4P55056 127 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 VCPP55072 806 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 DIO3P55073 304 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 FGF8P55075 233 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 MFAP1P55081 439 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 MFAP3P55082 362 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 MFAP4P55083 255 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 UCNP55089 124 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms