RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 CDH24Q86UP0 819 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 PGBD3Q8N328 593 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 CREB3L4Q8TEY5 395 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 ULK4Q96C45 1275 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 ZBED6CLQ96FA7 236 aaPredicted RBP14.45□□□□□ -0.1
CTNS-202ENST00000381870 TOE1Q96GM8 510 aaKnown RBP14.45□□□□□ -0.1
CTNS-202ENST00000381870 QRFPRQ96P65 431 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 C16orf70Q9BSU1 422 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 RERGLQ9H628 205 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 MAPRE3Q9UPY8 281 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 AUP1Q9Y679 476 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 KCNE2Q9Y6J6 123 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 NUDT7P0C024 238 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 DDCP20711 480 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 DGKEP52429 567 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 MLLT6P55198 1093 aaPredicted RBP14.44□□□□□ -0.1
CTNS-202ENST00000381870 CLDN8P56748 225 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 CACNB2Q08289 660 aaPredicted RBP14.44□□□□□ -0.1
CTNS-202ENST00000381870 WSCD2Q2TBF2 565 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.44□□□□□ -0.1
CTNS-202ENST00000381870 TEX261Q6UWH6 196 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 PLEKHM3Q6ZWE6 761 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 TRIM46Q7Z4K8 759 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 OR9Q2Q8NGE9 314 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 LHFPL5Q8TAF8 219 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 KCNN2Q9H2S1 579 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 RETREG1Q9H6L5 497 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 ELF5Q9UKW6 265 aaPredicted RBP14.44□□□□□ -0.1
CTNS-202ENST00000381870 PTCH2Q9Y6C5 1203 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 U3KQ87 197 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 MANBAO00462 879 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 GPR182O15218 404 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 PLOD3O60568 738 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 GPR32O75388 356 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 MTRF1O75570 445 aaKnown RBP14.44□□□□□ -0.1
CTNS-202ENST00000381870 PSMA1P25786 263 aaKnown RBP14.44□□□□□ -0.1
CTNS-202ENST00000381870 HOXD10P28358 340 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.44□□□□□ -0.1
CTNS-202ENST00000381870 RGS1Q08116 209 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 MRPL28Q13084 256 aaKnown RBP14.44□□□□□ -0.1
CTNS-202ENST00000381870 XKR4Q5GH76 650 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 KLHL17Q6TDP4 642 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 RASAL3Q86YV0 1011 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 C2orf69Q8N8R5 385 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 ZNF680Q8NEM1 530 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 TRPM4Q8TD43 1214 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 SLC25A46Q96AG3 418 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 ACPTQ9BZG2 426 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 ASIC5Q9NY37 505 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 ZNF224Q9NZL3 707 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 MALT1Q9UDY8 824 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 PLEKHB1Q9UF11 243 aaPredicted RBP14.44□□□□□ -0.1
CTNS-202ENST00000381870 ACTL7AQ9Y615 435 aa14.44□□□□□ -0.1
CTNS-202ENST00000381870 LOC730098B7Z3J9 87 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 H3BRB1 525 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 PTGESO14684 152 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 SLC9A3R1O14745 358 aaPredicted RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 AP2A2O94973 939 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 GLUD1P00367 558 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 ARSBP15848 533 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 TALDO1P37837 337 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 CDH18Q13634 790 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 GLT6D1Q7Z4J2 308 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 MDGA1Q8NFP4 955 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 SPPL2AQ8TCT8 520 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 HYLS1Q96M11 299 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 CSNK1G1Q9HCP0 422 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 STUB1Q9UNE7 303 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 TLR6Q9Y2C9 796 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 LSM2Q9Y333 95 aaKnown RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 WASH4PA8MWX3 477 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 TMEM229AB2RXF0 380 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 FABP7O15540 132 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 CSO75390 466 aaKnown RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 CCNB2O95067 398 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 CHRM5P08912 532 aaPredicted RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 MSL3P1P0C860 447 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 FAM157BP0CG42 384 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 SRCP12931 536 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 ZXDBP98169 803 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 EXOC3L2Q2M3D2 409 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 ANKRD54Q6NXT1 300 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 ZNF621Q6ZSS3 439 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 GET4Q7L5D6 327 aaPredicted RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 CIR1Q86X95 450 aaPredicted RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 LGI4Q8N135 537 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 LSM14AQ8ND56 463 aaKnown RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 TMEM40Q8WWA1 233 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 MAL2Q969L2 176 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 MSLNLQ96KJ4 702 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 MAGEB10Q96LZ2 347 aaPredicted RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 PANX1Q96RD7 426 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 TM9SF2Q99805 663 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 POLR1EQ9GZS1 481 aaKnown RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 MCOLN1Q9GZU1 580 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 BPIFA1Q9NP55 256 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 PAK6Q9NQU5 681 aaPredicted RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 RBFOX1Q9NWB1 397 aaKnown RBP14.43□□□□□ -0.1
CTNS-202ENST00000381870 NDUFAF4Q9P032 175 aa14.43□□□□□ -0.1
CTNS-202ENST00000381870 FKBPLQ9UIM3 349 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms