RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 PCDHB14Q9Y5E9 798 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 MYO10Q9HD67 2058 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 LOC285095A0A1B0GVY8 99 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 CPSF4LA6NMK7 179 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 RIIAD1A6NNX1 92 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 NUP62P37198 522 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 OPRL1P41146 370 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 GUCA1AP43080 201 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 TMEM44Q2T9K0 475 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 KIAA1161Q6NSJ0 714 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 REEP3Q6NUK4 255 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 ARRDC2Q8TBH0 407 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 ING5Q8WYH8 240 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 OVCA2Q8WZ82 227 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 CLIP3Q96DZ5 547 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 NARS2Q96I59 477 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 FAM129BQ96TA1 746 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 OR51V1Q9H2C8 321 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 REEP4Q9H6H4 257 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 IL17CQ9P0M4 197 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 DKK3Q9UBP4 350 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 NDOR1Q9UHB4 597 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 PCDHGA8Q9Y5G5 932 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 HSPE1-MOB4S4R3N1 261 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 GRXCR2A6NFK2 248 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 K7ERQ8 282 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 KHDRBS3O75525 346 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 POP7O75817 140 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 CDRT1O95170 752 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 ATE1O95260 518 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 ITIH1P19827 911 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 ADRA1AP35348 466 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 EIF2B5Q13144 721 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 PPIGQ13427 754 aaKnown RBP eCLIP12.3□□□□□ -0.443e-8■■□□□ 13.2
DNMT3A-204ENST00000380756 MRPL10Q7Z7H8 261 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 FEVQ99581 238 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 MIR1-1HGQ9H1L0 117 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 OLAHQ9NV23 265 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 AKAP7Q9P0M2 348 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 PCDHB11Q9Y5F2 797 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 PCDHGA10Q9Y5H3 936 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 ISPDA4D126 451 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 MYADML2A6NDP7 307 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 NFATC1O95644 943 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SLC2A2P11168 524 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 PTPN2P17706 415 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 MAGEA12P43365 314 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 NCBP2P52298 156 aaKnown RBP eCLIP12.29□□□□□ -0.442e-6■□□□□ 9.7
DNMT3A-204ENST00000380756 SLC9A5Q14940 896 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 CYP27C1Q4G0S4 372 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 ALKAL1Q6UXT8 129 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 ZSWIM9Q86XI8 627 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 PEX5LQ8IYB4 626 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 MEIOBQ8N635 442 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 OR10H4Q8NGA5 316 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SHKBP1Q8TBC3 707 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 PROKR1Q8TCW9 393 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 CYB5D2Q8WUJ1 264 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 MGLLQ99685 303 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 ASPNQ9BXN1 380 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SLAMF8Q9P0V8 285 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 NUP205Q92621 2012 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TBC1D3DA0A087WVF3 549 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TBC1D3IA0A087WXS9 549 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TBC1D3EA0A087X179 549 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TBC1D3KA0A087X1G2 549 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TBC1D3FA6NER0 549 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TBC1D3LB9A6J9 549 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TBC1D3HP0C7X1 549 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 CTSEP14091 401 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 RELAQ04206 551 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SEMA3BQ13214 749 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TBC1D3GQ6DHY5 549 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TBC1D3CQ6IPX1 549 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 RTL4Q6ZR62 310 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 PIWIL3Q7Z3Z3 882 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TBC1D3Q8IZP1 549 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SPARTQ8N0X7 666 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 FLCNQ8NFG4 579 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 NETO1Q8TDF5 533 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TP53INP1Q96A56 240 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 MND1Q9BWT6 205 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TTLL2Q9BWV7 592 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 ARNTLO00327 626 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 STSP08842 583 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 JUPP14923 745 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 AGXTP21549 392 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 CCND3P30281 292 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 AVPR1BP47901 424 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 CCR8P51685 355 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SMSP52788 366 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SLC13A2Q13183 592 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 CDK5R2Q13319 367 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 KCNC3Q14003 757 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 ATP13A5Q4VNC0 1218 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SUSD1Q6UWL2 747 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 OTOP2Q7RTS6 562 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 RBM23Q86U06 439 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TRNT1Q96Q11 434 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 NEUROD4Q9HD90 331 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms