RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ATG13O75143 517 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 PABPC1P11940 636 aaKnown RBP15.71■□□□□ 0.11
VPS16-203ENST00000380469 TIA1P31483 386 aaKnown RBP eCLIP15.71■□□□□ 0.11
VPS16-203ENST00000380469 PREPP48147 710 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 GSSP48637 474 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 IFITM3Q01628 133 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 PCDH1Q08174 1060 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 GAB1Q13480 694 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 TMEM25Q86YD3 366 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 SNX29P2Q8IUI4 249 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 KLHDC8AQ8IYD2 350 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 MCFD2Q8NI22 146 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 REPS1Q96D71 796 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 CXorf40BQ96DE9 158 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 DACH2Q96NX9 599 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 PKP4Q99569 1192 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 SLC46A2Q9BY10 475 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 BHLHE41Q9C0J9 482 aaPredicted RBP15.71■□□□□ 0.11
VPS16-203ENST00000380469 PLCXD1Q9NUJ7 323 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 RAPGEFL1Q9UHV5 662 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 PSORS1C1Q9UIG5 152 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.71■□□□□ 0.11
VPS16-203ENST00000380469 LYVE1Q9Y5Y7 322 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 KCNE2Q9Y6J6 123 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 WASH3PC4AMC7 463 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 NEDD8-MDP1E9PL57 170 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 AIREO43918 545 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 PCDH7O60245 1069 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 SLC16A8O95907 504 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 LAG3P18627 525 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 PTX3P26022 381 aaPredicted RBP15.71■□□□□ 0.1
VPS16-203ENST00000380469 MAPK9P45984 424 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 BDKRB1P46663 353 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 RPS13P62277 151 aaKnown RBP15.71■□□□□ 0.1
VPS16-203ENST00000380469 PPIGQ13427 754 aaKnown RBP eCLIP15.71■□□□□ 0.11e-6■■■□□ 18.6
VPS16-203ENST00000380469 ZNF284Q2VY69 593 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 CCSMST1Q4G0I0 132 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 ADNP2Q6IQ32 1131 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 MED27Q6P2C8 311 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 FAM124AQ86V42 546 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 OR56A3Q8NH54 315 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 HEPHQ9BQS7 1158 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 DCSTAMPQ9H295 470 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 NDUFAF4Q9P032 175 aa15.71■□□□□ 0.1
VPS16-203ENST00000380469 FADS2P1A8MWK0 482 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 TGM5O43548 720 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 ADAM23O75077 832 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 ANXA8P13928 327 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 IMPA1P29218 277 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 PNLIPRP1P54315 467 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 SYT16Q17RD7 645 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 IFI44LQ53G44 452 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 MLIPQ5VWP3 458 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 Q6ZPB1 254 aaPredicted RBP15.7■□□□□ 0.1
VPS16-203ENST00000380469 OR10G2Q8NGC3 310 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 BTN2A2Q8WVV5 523 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 FOXJ1Q92949 421 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 CCM2Q9BSQ5 444 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 DSN1Q9H410 356 aa15.7■□□□□ 0.1
VPS16-203ENST00000380469 GCM2O75603 506 aaPredicted RBP15.69■□□□□ 0.1
VPS16-203ENST00000380469 RFPL2O75678 378 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 TGM1P22735 817 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 XPAP23025 273 aaPredicted RBP15.69■□□□□ 0.1
VPS16-203ENST00000380469 UGT2B10P36537 528 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 PRIM2P49643 509 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 PPP5CP53041 499 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 ATN1P54259 1190 aaPredicted RBP15.69■□□□□ 0.1
VPS16-203ENST00000380469 RPS3AP61247 264 aaKnown RBP15.69■□□□□ 0.1
VPS16-203ENST00000380469 TIGD6Q17RP2 521 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 GCNT6Q5T4J0 391 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 HENMT1Q5T8I9 393 aaKnown RBP15.69■□□□□ 0.1
VPS16-203ENST00000380469 PLEKHG7Q6ZR37 379 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 TMCO2Q7Z6W1 182 aaPredicted RBP15.69■□□□□ 0.1
VPS16-203ENST00000380469 ZNF605Q86T29 641 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 SLC5A8Q8N695 610 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 RASGEF1AQ8N9B8 481 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 RHOXF1Q8NHV9 184 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 FAM83CQ9BQN1 747 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 BTBD2Q9BX70 525 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 MMP27Q9H306 513 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 REEP4Q9H6H4 257 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 SPASTQ9UBP0 616 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 ATP6V1HQ9UI12 483 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 POFUT2Q9Y2G5 429 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 ZNF451Q9Y4E5 1061 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 CLCA1A8K7I4 914 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 TMEM229AB2RXF0 380 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 LEFTY1O75610 366 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 GNRH1P01148 92 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 CDK1P06493 297 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 ETFAP13804 333 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 ITGA2P17301 1181 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 C21orf33P30042 268 aaPredicted RBP15.69■□□□□ 0.1
VPS16-203ENST00000380469 LIPAP38571 399 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 PXNP49023 591 aaPredicted RBP15.69■□□□□ 0.1
VPS16-203ENST00000380469 CTSCP53634 463 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 SPIBQ01892 262 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 DNASE1L3Q13609 305 aa15.69■□□□□ 0.1
VPS16-203ENST00000380469 TBCEQ15813 527 aaPredicted RBP15.69■□□□□ 0.1
VPS16-203ENST00000380469 CNKSR3Q6P9H4 555 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms