RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 RPA4Q13156 261 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 RPE65Q16518 533 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 PRSS36Q5K4E3 855 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 GCNT6Q5T4J0 391 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 TMEM215Q68D42 235 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 UNC5DQ6UXZ4 953 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 CYP4V2Q6ZWL3 525 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 SYT13Q7L8C5 426 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 HPS6Q86YV9 775 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 SPPL2CQ8IUH8 684 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 C1orf210Q8IVY1 113 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 OFCC1Q8IZS5 231 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 GATSQ8NAP1 163 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 ZSCAN1Q8NBB4 408 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 OR4K14Q8NGD5 310 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 NEIL2Q969S2 332 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 TMEM125Q96AQ2 219 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 COL21A1Q96P44 957 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 FAM129BQ96TA1 746 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 SH3GL2Q99962 352 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 CCDC28BQ9BUN5 200 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 LGR4Q9BXB1 951 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 ALG2Q9H553 416 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 SLC39A1Q9NY26 324 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 C19orf25Q9UFG5 118 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 DUSP12Q9UNI6 340 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 PTGES3LE9PB15 166 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 STX16-NPEPL1H3BU86 382 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 STX16O14662 325 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 HTRA2O43464 458 aaPredicted RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 CTSLP07711 333 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 AHCYP23526 432 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 OR1D4P47884 311 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 PSMD4P55036 377 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 OR4D2P58180 307 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ACY1Q03154 408 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 LIPEQ05469 1076 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 SMAD2Q15796 467 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 DUOXA1Q1HG43 343 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 UNC50Q53HI1 259 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 METTL21CQ5VZV1 264 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 DENND5AQ6IQ26 1287 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ARMC8Q8IUR7 673 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 AADATQ8N5Z0 425 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 OR10Q1Q8NGQ4 319 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 SLC37A2Q8TED4 501 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 DENND1AQ8TEH3 1009 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ZNF480Q8WV37 535 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 CNDP2Q96KP4 475 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 CEP19Q96LK0 163 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 CRB3Q9BUF7 120 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 TMEM27Q9HBJ8 222 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ZBTB20Q9HC78 741 aaPredicted RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 SSU72Q9NP77 194 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 TREX1Q9NSU2 369 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 RGPD3A6NKT7 1758 aaPredicted RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 RGPD4Q7Z3J3 1758 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 FAM227AF5H4B4 570 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 KCNJ13O60928 360 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ENTPD5O75356 428 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 UNC5CO95185 931 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ZBTB11O95625 1053 aaPredicted RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 CST1P01037 141 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 PRKAR1AP10644 381 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 MTHFD1P11586 935 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 PTNP21246 168 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 IFNGR2P38484 337 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 RPL34P49207 117 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ZXDBP98169 803 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 BNIP3Q12983 259 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 KHDRBS2Q5VWX1 349 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 STEAP4Q687X5 459 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 FRMD7Q6ZUT3 714 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 PEX5LQ8IYB4 626 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 RBM15BQ8NDT2 890 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 MIEF2Q96C03 454 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 SLC35A5Q9BS91 424 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 EDEM2Q9BV94 578 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 TRNAU1APQ9NX07 287 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ELOVL7A1L3X0 281 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 FADS2P1A8MWK0 482 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 KPNA4O00629 521 aaPredicted RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 PCDHGA12O60330 932 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 IL3P08700 152 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ALOX5P09917 674 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 UBTFL6P0CB48 400 aaPredicted RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ADRA1AP35348 466 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 KCNC1P48547 511 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 CCT3P49368 545 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 HTR6P50406 440 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 EPHA5P54756 1037 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 OR1D5P58170 312 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 GPR18Q14330 331 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 ABRAXAS2Q15018 415 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 TAZQ16635 292 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 TYW3Q6IPR3 259 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 NOXRED1Q6NXP6 359 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 TIFABQ6ZNK6 161 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 FITM2Q8N6M3 262 aa8.14□□□□□ -1.11
CRNKL1-202ENST00000377340 AGBL5Q8NDL9 886 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms