RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 BTBD3Q9Y2F9 522 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 DNMT3AQ9Y6K1 912 aaPredicted RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 ANKRD33BA6NCL7 494 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 ERI3O43414 337 aaKnown RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 SGTAO43765 313 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 ETHE1O95571 254 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 FGF4P08620 206 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 SLC26A3P40879 764 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 ACTR1BP42025 376 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 ST13P50502 369 aaKnown RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 CCR4P51679 360 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 TPTEP56180 551 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 ACTR1AP61163 376 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 RAPSNQ13702 412 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 NEK10Q6ZWH5 1172 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 CROCCP3Q8IVE0 287 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 CCDC116Q8IYX3 515 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 MINDY1Q8N5J2 469 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 NODALQ96S42 347 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 ABCG4Q9H172 646 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 OTOFQ9HC10 1997 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 SLC9A3R1O14745 358 aaPredicted RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 EEDO75530 441 aaKnown RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 PRNPP04156 253 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 C8GP07360 202 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 CD247P20963 164 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 TGFBR1P36897 503 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 AVPR1BP47901 424 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 EEFSECP57772 596 aaKnown RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 LASP1Q14847 261 aaKnown RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 ZBED5Q49AG3 693 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 LIPIQ6XZB0 460 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 OR8H2Q8N162 312 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 SLC15A4Q8N697 577 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 MRPL43Q8N983 215 aaKnown RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 SLC43A3Q8NBI5 491 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 FGF13Q92913 245 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 TSACCQ96A04 125 aaPredicted RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 ZNF583Q96ND8 569 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 SAMD11Q96NU1 681 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 QRSL1Q9H0R6 528 aaKnown RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 DPEP2Q9H4A9 486 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 ZNF696Q9H7X3 374 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 ZCCHC3Q9NUD5 404 aaKnown RBP11.25□□□□□ -0.61
DDR1-227ENST00000376570 HSFX1Q9UBD0 423 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 NDOR1Q9UHB4 597 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 PCDHGA11Q9Y5H2 935 aa11.25□□□□□ -0.61
DDR1-227ENST00000376570 C1QTNF3-AMACRE9PGA6 284 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 TIMP1P01033 207 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 CKMT1AP12532 417 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 DNAJB1P25685 340 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 BMPR1AP36894 532 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 RNASE12Q5GAN4 147 aaKnown RBP11.24□□□□□ -0.61
DDR1-227ENST00000376570 PRAMEF13Q5VWM6 474 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 PPP2R2DQ66LE6 453 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 SLC7A5P1Q8MH63 180 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 SCML4Q8N228 414 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 POC5Q8NA72 575 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 OR5D16Q8NGK9 328 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 ATL1Q8WXF7 558 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 TBX5Q99593 518 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 THUMPD1Q9NXG2 353 aaKnown RBP11.24□□□□□ -0.61
DDR1-227ENST00000376570 SEC14L3Q9UDX4 400 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 MALT1Q9UDY8 824 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 PCDHGA8Q9Y5G5 932 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 LOC100130705A0A1B0GUX0 176 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 CBFA2T3O75081 653 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 CD47Q08722 323 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 ZNF234Q14588 700 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 LYPLAL1Q5VWZ2 237 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 BRAT1Q6PJG6 821 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 ZC3H14Q6PJT7 736 aaKnown RBP11.24□□□□□ -0.61
DDR1-227ENST00000376570 TMIGD1Q6UXZ0 262 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 CEACAM20Q6UY09 585 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 ZNF605Q86T29 641 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 SLC34A3Q8N130 599 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 ABCB9Q9NP78 766 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 ADAP2Q9NPF8 381 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 TAS2R16Q9NYV7 291 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 PTBP2Q9UKA9 531 aaKnown RBP11.24□□□□□ -0.61
DDR1-227ENST00000376570 SNX11Q9Y5W9 270 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 MIA3Q5JRA6 1907 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 HYAL3O43820 417 aaPredicted RBP11.24□□□□□ -0.61
DDR1-227ENST00000376570 CYP17A1P05093 508 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 CTSLP07711 333 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 AOAHP28039 575 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 CLCN4P51793 760 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 NPTX1Q15818 432 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 NKG7Q16617 165 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 PDCD4Q53EL6 469 aaKnown RBP11.24□□□□□ -0.61
DDR1-227ENST00000376570 C10orf53Q8N6V4 93 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 C11orf65Q8NCR3 313 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 ZNF480Q8WV37 535 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 BTN2A2Q8WVV5 523 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 RPP25Q9BUL9 199 aaKnown RBP11.24□□□□□ -0.61
DDR1-227ENST00000376570 OLAHQ9NV23 265 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 SLC25A37Q9NYZ2 338 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 DNAJB9Q9UBS3 223 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 PPT2Q9UMR5 302 aa11.24□□□□□ -0.61
DDR1-227ENST00000376570 CCDC85CA6NKD9 419 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms