RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 LCKP06239 509 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 CD36P16671 472 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 PTX3P26022 381 aaPredicted RBP10.27□□□□□ -0.76
ABCF1-202ENST00000376545 IMPA1P29218 277 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 RRM2P31350 389 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 EEF1A2Q05639 463 aaKnown RBP10.27□□□□□ -0.76
ABCF1-202ENST00000376545 SF1Q15637 639 aaKnown RBP10.27□□□□□ -0.76
ABCF1-202ENST00000376545 PAGE2BQ5JRK9 111 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 TMEM236Q5W0B7 351 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 KIAA0907Q7Z7F0 614 aaPredicted RBP10.27□□□□□ -0.76
ABCF1-202ENST00000376545 NLRP8Q86W28 1048 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 NAGSQ8N159 534 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 OR7G3Q8NG95 312 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 THSD1Q9NS62 852 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 ATAD3AQ9NVI7 634 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 SLC25A13Q9UJS0 675 aa10.27□□□□□ -0.76
ABCF1-202ENST00000376545 TRAV19A0A0A6YYK7 116 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 MTX2O75431 263 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 GNRH1P01148 92 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 CYP2A6P11509 494 aaPredicted RBP10.27□□□□□ -0.77
ABCF1-202ENST00000376545 CD40LGP29965 261 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 LIPAP38571 399 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 MAPK9P45984 424 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 LIMS1P48059 325 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 PPP5CP53041 499 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 IL1RL1Q01638 556 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 PDE7AQ13946 482 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 PLEKHG7Q6ZR37 379 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 DNAJC22Q8N4W6 341 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 C1orf52Q8N6N3 182 aaKnown RBP10.27□□□□□ -0.77
ABCF1-202ENST00000376545 FBXO15Q8NCQ5 510 aaPredicted RBP10.27□□□□□ -0.77
ABCF1-202ENST00000376545 VPS37AQ8NEZ2 397 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 AUTS2Q8WXX7 1259 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 RPL3LQ92901 407 aaKnown RBP10.27□□□□□ -0.77
ABCF1-202ENST00000376545 SCAMP4Q969E2 229 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 DSN1Q9H410 356 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 TMEM38AQ9H6F2 299 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 SGK2Q9HBY8 427 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 RASSF1Q9NS23 344 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 SLCO3A1Q9UIG8 710 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 VPS4AQ9UN37 437 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 PRAMEF25A6NGN4 478 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 ADAMDEC1O15204 470 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 KLHL18O94889 574 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 CDK1P06493 297 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 ANXA4P09525 319 aaPredicted RBP10.27□□□□□ -0.77
ABCF1-202ENST00000376545 ALDH4A1P30038 563 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 TIA1P31483 386 aaKnown RBP eCLIP10.27□□□□□ -0.77
ABCF1-202ENST00000376545 SLC19A1P41440 591 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 PRLHRP49683 370 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 HMGA2P52926 109 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 CCL23P55773 120 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 RBBP4Q09028 425 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 ELP6Q0PNE2 266 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 CDC20Q12834 499 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 IRF3Q14653 427 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 CCSMST1Q4G0I0 132 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF385BQ569K4 471 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 PRSS36Q5K4E3 855 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 ADNP2Q6IQ32 1131 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 TUBA3EQ6PEY2 450 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 CCDC81Q6ZN84 652 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 SLCO4C1Q6ZQN7 724 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 TECPR1Q7Z6L1 1165 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 ADCK1Q86TW2 530 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 CCDC103Q8IW40 242 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 CADM3Q8N126 398 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 C11orf65Q8NCR3 313 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 HUS1BQ8NHY5 278 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 MAL2Q969L2 176 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 TPD52L3Q96J77 140 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 ZSCAN5AQ9BUG6 496 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 SLC46A2Q9BY10 475 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 RAD18Q9NS91 495 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 ABT1Q9ULW3 272 aaKnown RBP10.27□□□□□ -0.77
ABCF1-202ENST00000376545 UGT2A1Q9Y4X1 527 aa10.27□□□□□ -0.77
ABCF1-202ENST00000376545 MYOFQ9NZM1 2061 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 TMEM247A6NEH6 219 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 CLCA1A8K7I4 914 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 EFCAB9A8MZ26 197 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 FOXE1O00358 373 aaPredicted RBP10.26□□□□□ -0.77
ABCF1-202ENST00000376545 PCDH7O60245 1069 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 HLA-EP13747 358 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF8P17098 575 aaPredicted RBP10.26□□□□□ -0.77
ABCF1-202ENST00000376545 PNLIPRP1P54315 467 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 LSM3P62310 102 aaKnown RBP10.26□□□□□ -0.77
ABCF1-202ENST00000376545 PPIGQ13427 754 aaKnown RBP eCLIP10.26□□□□□ -0.773e-7■□□□□ 11.1
ABCF1-202ENST00000376545 NAE1Q13564 534 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 DGCR6Q14129 220 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 LRRC73Q5JTD7 316 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 CATSPEREQ5SY80 951 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.26□□□□□ -0.77
ABCF1-202ENST00000376545 C10orf62Q5T681 223 aaPredicted RBP10.26□□□□□ -0.77
ABCF1-202ENST00000376545 AHSA2Q719I0 299 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 ADIPOR2Q86V24 386 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 SLAIN1Q8ND83 568 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 BTN2A2Q8WVV5 523 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 GGHQ92820 318 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 PKP4Q99569 1192 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 MMP27Q9H306 513 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms