RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FOSL1P15407 271 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 ALAS2P22557 587 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 CCNCP24863 283 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 ZXDBP98169 803 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.74□□□□□ -0.53
C9orf3-203ENST00000375315 OR52E4Q8NGH9 312 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 GPR151Q8TDV0 419 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 ANKRD49Q8WVL7 239 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 MYLIPQ8WY64 445 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 DNASE1L2Q92874 299 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 FERD3LQ96RJ6 166 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 EVA1BQ9NVM1 165 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 KIF17Q9P2E2 1029 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 DIMT1Q9UNQ2 313 aaKnown RBP11.74□□□□□ -0.53
C9orf3-203ENST00000375315 TRIOBPQ9H2D6 2365 aa11.74□□□□□ -0.53
C9orf3-203ENST00000375315 MUSKO15146 869 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 RAMP2O60895 175 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 WBP4O75554 376 aaKnown RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 ABLIM3O94929 683 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 PRR35P0CG20 571 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 EPCAMP16422 314 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 DAPP51397 102 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 PER3P56645 1201 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 ERVK-8P63133 956 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 AANATQ16613 207 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 KLHL12Q53G59 568 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 TOR1AIP1Q5JTV8 583 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 CPZQ66K79 652 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 KDM4DQ6B0I6 523 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 GAREM2Q75VX8 874 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 ISCA2Q86U28 154 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 RTL3Q8N8U3 475 aaKnown RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF548Q8NEK5 533 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 OR6K2Q8NGY2 324 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 TBCDQ9BTW9 1192 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 FICDQ9BVA6 458 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 MYO16Q9Y6X6 1858 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 ARNTLO00327 626 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 VPS26AO75436 327 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 RFPL3O75679 317 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 SIX3O95343 332 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 HLA-DQB2P05538 268 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 HOXD4P09016 255 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 HSMCR30P0CW71 290 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 SLC2A3P11169 496 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 HOXB1P14653 301 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 HMGCLP35914 325 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 KCNC1P48547 511 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 DSC2Q02487 901 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 RUNX1T1Q06455 604 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 GTF2H3Q13889 308 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF79Q15937 498 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 HABP4Q5JVS0 413 aaKnown RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 PDZK1Q5T2W1 519 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 GPR158Q5T848 1215 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 HECTD2Q5U5R9 776 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 TMC8Q8IU68 726 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 GDPD1Q8N9F7 314 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 OR10A6Q8NH74 314 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 MARC2Q969Z3 335 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 COL21A1Q96P44 957 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 SMIM14Q96QK8 99 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 RAD9AQ99638 391 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 RC3H2Q9HBD1 1191 aaKnown RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 BRWD1Q9NSI6 2320 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 NLRC5Q86WI3 1866 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 CIB4A0PJX0 185 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 PI15O43692 258 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 MAFKO60675 156 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 STC2O76061 302 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 CDK1P06493 297 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 RETP07949 1114 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 CD86P42081 329 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 SLC11A2P49281 568 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 LIMK1P53667 647 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 CREMQ03060 361 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 RAB33AQ14088 237 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 SLC14A2Q15849 920 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 KIAA0930Q6ICG6 404 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 TEX261Q6UWH6 196 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 CAMKK1Q8N5S9 505 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 ZBTB44Q8NCP5 570 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF680Q8NEM1 530 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 OR8K5Q8NH50 307 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 FSD1LQ9BXM9 530 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 SERHL2Q9H4I8 314 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 KRT84Q9NSB2 600 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 DCAF13Q9NV06 445 aaKnown RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 MRPL39Q9NYK5 338 aaKnown RBP11.73□□□□□ -0.53
C9orf3-203ENST00000375315 PSORS1C1Q9UIG5 152 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 ZNF175Q9Y473 711 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 ALG5Q9Y673 324 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 U3KQ87 197 aa11.73□□□□□ -0.53
C9orf3-203ENST00000375315 IFRD1O00458 451 aaPredicted RBP11.72□□□□□ -0.53
C9orf3-203ENST00000375315 STX16O14662 325 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 PCDHGA12O60330 932 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 ACSL4O60488 711 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 PPM1AP35813 382 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 CCT3P49368 545 aaKnown RBP11.72□□□□□ -0.53
C9orf3-203ENST00000375315 LCP2Q13094 533 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms