RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 UGT2B15P54855 530 aa13.07□□□□□ -0.32
CLIC4-201ENST00000374379 NUAK2Q9H093 628 aa13.07□□□□□ -0.32
CLIC4-201ENST00000374379 PLGRKTQ9HBL7 147 aa13.07□□□□□ -0.32
CLIC4-201ENST00000374379 AGPAT4Q9NRZ5 378 aa13.07□□□□□ -0.32
CLIC4-201ENST00000374379 CLN6Q9NWW5 311 aa13.07□□□□□ -0.32
CLIC4-201ENST00000374379 RWDD3Q9Y3V2 267 aa13.07□□□□□ -0.32
CLIC4-201ENST00000374379 BRCA1P38398 1863 aaKnown RBP13.06□□□□□ -0.32
CLIC4-201ENST00000374379 H7C0S8 307 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 MPC1LP0DKB6 136 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 TIA1P31483 386 aaKnown RBP eCLIP13.06□□□□□ -0.323e-10■■■■■ 29.3
CLIC4-201ENST00000374379 DNAJA1P31689 397 aaKnown RBP13.06□□□□□ -0.32
CLIC4-201ENST00000374379 TEAD4Q15561 434 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 CMPK2Q5EBM0 449 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 HMBOX1Q6NT76 420 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF551Q7Z340 670 aaPredicted RBP13.06□□□□□ -0.32
CLIC4-201ENST00000374379 COMMD6Q7Z4G1 85 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 HMGB4Q8WW32 186 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 FGF13Q92913 245 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 SMARCD2Q92925 531 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 CIDECQ96AQ7 238 aaPredicted RBP13.06□□□□□ -0.32
CLIC4-201ENST00000374379 OTUB2Q96DC9 234 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 HEBP1Q9NRV9 189 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 GALNT8Q9NY28 637 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF225Q9UK10 706 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 TBX21Q9UL17 535 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 PCDHA9Q9Y5H5 950 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 UGT2B17O75795 530 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 NUDT7P0C024 238 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 STT3AP46977 705 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 ENTPD1P49961 510 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 RAB39AQ14964 217 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 ADNP2Q6IQ32 1131 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 NAGSQ8N159 534 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 ADAMTS15Q8TE58 950 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 HSPBAP1Q96EW2 488 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 SIPA1Q96FS4 1042 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF597Q96LX8 424 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 VIPP01282 170 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 ID2Q02363 134 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 COQ5Q5HYK3 327 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 WDR36Q8NI36 951 aaKnown RBP13.06□□□□□ -0.32
CLIC4-201ENST00000374379 RC3H2Q9HBD1 1191 aaKnown RBP13.06□□□□□ -0.32
CLIC4-201ENST00000374379 ATXN10Q9UBB4 475 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 CD300AQ9UGN4 299 aa13.06□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF860A6NHJ4 632 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 OR52A4PA6NMU1 304 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 FXYD1O00168 92 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 PTX3P26022 381 aaPredicted RBP13.05□□□□□ -0.32
CLIC4-201ENST00000374379 SEPHS1P49903 392 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 TAS2R41P59536 307 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 DSTNP60981 165 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 LASP1Q14847 261 aaKnown RBP13.05□□□□□ -0.32
CLIC4-201ENST00000374379 ATG9BQ674R7 924 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 ANKRD33Q7Z3H0 272 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 DCUN1D3Q8IWE4 304 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF480Q8WV37 535 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 SMPDL3AQ92484 453 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 RNF31Q96EP0 1072 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 NTMT1Q9BV86 223 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 REEP4Q9H6H4 257 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 HMG20AQ9NP66 347 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 ADAP2Q9NPF8 381 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 PCDHGB3Q9Y5G1 929 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 A0A1B0GVG6 124 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 PIPSLA2A3N6 862 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 K7ESM1 405 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 RFXAPO00287 272 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 TFPTP0C1Z6 253 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 HPGDP15428 266 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 AGXTP21549 392 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 TLX1P31314 330 aaPredicted RBP13.05□□□□□ -0.32
CLIC4-201ENST00000374379 RYKP34925 604 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 SOX6P35712 828 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 MAP2K4P45985 399 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 NCF4Q15080 339 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF542PQ5EBM4 170 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 ASTLQ6HA08 431 aaPredicted RBP13.05□□□□□ -0.32
CLIC4-201ENST00000374379 PDLIM5Q96HC4 596 aaKnown RBP13.05□□□□□ -0.32
CLIC4-201ENST00000374379 ART5Q96L15 291 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF583Q96ND8 569 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF696Q9H7X3 374 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 SEC16AO15027 2179 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 NUAK1O60285 661 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 EN2P19622 333 aaPredicted RBP13.05□□□□□ -0.32
CLIC4-201ENST00000374379 RXRGP48443 463 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 DCST1Q5T197 706 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 FBXO46Q6PJ61 603 aaPredicted RBP13.05□□□□□ -0.32
CLIC4-201ENST00000374379 TRIM69Q86WT6 500 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 NUDT13Q86X67 352 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 DEPDC4Q8N2C3 294 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 TFAP2CQ92754 450 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 MYDGFQ969H8 173 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 ISOC1Q96CN7 298 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 NINQ8N4C6 2090 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 MYOFQ9NZM1 2061 aa13.05□□□□□ -0.32
CLIC4-201ENST00000374379 OR10H2O60403 315 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 CD160O95971 181 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 HOXB2P14652 356 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 MYL12AP19105 171 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 PSMB5P28074 263 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms