RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 GBA3Q9H227 469 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 IFT46Q9NQC8 304 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 PIGVQ9NUD9 493 aa6.4□□□□□ -1.39
CHD6-203ENST00000373233 EFCAB7A8K855 629 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 EEF1E1O43324 174 aaKnown RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 RASAL1O95294 804 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 CSTF2P33240 577 aaKnown RBP eCLIP6.39□□□□□ -1.393e-7■■■■■ 30.6
CHD6-203ENST00000373233 SLC10A7Q0GE19 358 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 RFTN1Q14699 578 aaPredicted RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 EML3Q32P44 896 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 RFPL4BQ6ZWI9 263 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 SYVN1Q86TM6 617 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 OR6C4Q8NGE1 309 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 C17orf62Q9BQA9 187 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 IFT27Q9BW83 186 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 SCML2Q9UQR0 700 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 A0A1B0GVI7 797 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 FAM86C2PA6NEL3 165 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 MEIS3P2A8K0S8 358 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 ZNF705FA8MVS1 300 aaPredicted RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 LRRN3E7EW58 273 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 AZIN1O14977 448 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 CDRT1O95170 752 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 ZNF705DP0CH99 300 aaPredicted RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 ZNF705BP0CI00 300 aaPredicted RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 UROSP10746 265 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 CKMT2P17540 419 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 MAGEB1P43366 347 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 GRIN2CQ14957 1233 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 ADCK2Q7Z695 626 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 RAVER1Q8IY67 606 aaKnown RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 OR2T35Q8NGX2 323 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 NDNFQ8TB73 568 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 LRRN3Q9H3W5 708 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 MGAT4CQ9UBM8 478 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 ADAM10O14672 748 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 PET100P0DJ07 73 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 NUDT1P36639 197 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 PRKCDQ05655 676 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 ESPL1Q14674 2120 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 TSTQ16762 297 aaKnown RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 CTU1Q7Z7A3 348 aaKnown RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 CACUL1Q86Y37 369 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 OCEL1Q9H607 264 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 RPF2Q9H7B2 306 aaKnown RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 TIGARQ9NQ88 270 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 PCDHGA7Q9Y5G6 932 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 H0YAE9 185 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 ZNF254O75437 659 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 ST8SIA6P61647 398 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 AIMP2Q13155 320 aaKnown RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 AGMOQ6ZNB7 445 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 C7orf61Q8IZ16 206 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 OR2A12Q8NGT7 310 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 OR14K1Q8NGZ2 314 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 STK35Q8TDR2 534 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 SLC7A6OSQ96CW6 309 aaPredicted RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 MAP6Q96JE9 813 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 CACNA1IQ9P0X4 2223 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 FPGTO14772 594 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 TBL1XO60907 577 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 GLP2RO95838 553 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 GLUD1P00367 558 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 PTPN3P26045 913 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 ALDH3B2P48448 385 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 SYPL2Q5VXT5 272 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 PLPP4Q5VZY2 271 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 WDTC1Q8N5D0 677 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 TMEM185AQ8NFB2 350 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 FOLH1BQ9HBA9 442 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 USP29Q9HBJ7 922 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 BTRCQ9Y297 605 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 SLC28A1O00337 649 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 UGT2B17O75795 530 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 ECHS1P30084 290 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 WDR4P57081 412 aaKnown RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 PON3Q15166 354 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 TRIM40Q6P9F5 258 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 UNC5AQ6ZN44 842 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 QSOX2Q6ZRP7 698 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 DET1Q7L5Y6 550 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 SNIP1Q8TAD8 396 aaKnown RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 MFSD3Q96ES6 412 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 SCRN2Q96FV2 425 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 AURKBQ96GD4 344 aaPredicted RBP6.39□□□□□ -1.39
CHD6-203ENST00000373233 CNTNAP3BQ96NU0 1288 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 HSBP1L1C9JCN9 74 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 TLL1O43897 1013 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 UBL4AP11441 157 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 RAB3AP20336 220 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 S100GP29377 79 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 IDH3AP50213 366 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 PGAP1Q75T13 922 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 POMGNT2Q8NAT1 580 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 FBXO22Q8NEZ5 403 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 P2RY11Q96G91 374 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 TXNDC15Q96J42 360 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 CCDC32Q9BV29 185 aa6.39□□□□□ -1.39
CHD6-203ENST00000373233 SMOC2Q9H3U7 446 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms