RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ZBTB46Q86UZ6 589 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 AQP12AQ8IXF9 295 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 CSNK1A1LQ8N752 337 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 OR9I1Q8NGQ6 314 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 PSMA8Q8TAA3 256 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 SLC39A3Q9BRY0 314 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 COMMD9Q9P000 198 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 PGAP2Q9UHJ9 254 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 OARD1Q9Y530 152 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 MYH1P12882 1939 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 VSTM5A8MXK1 200 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 BHMG1C9JSJ3 638 aaPredicted RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 ZNF41P51814 821 aaPredicted RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 ZNF630Q2M218 657 aaPredicted RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 HNRNPA1L2Q32P51 320 aaKnown RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 LGI4Q8N135 537 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 KLHDC9Q8NEP7 349 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 RSL24D1Q9UHA3 163 aaKnown RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 PCDHGB7Q9Y5F8 929 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 NOBOXO60393 691 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 TRIM3O75382 744 aaPredicted RBP14.23□□□□□ -0.13
NDC1-201ENST00000371429 PRKD3O94806 890 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 CD72P21854 359 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 FBLP22087 321 aaKnown RBP14.23□□□□□ -0.13
NDC1-201ENST00000371429 KCNC1P48547 511 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 ARSDP51689 593 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 PCLAFQ15004 111 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 SYT16Q17RD7 645 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 USP30Q70CQ3 517 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 PIGWQ7Z7B1 504 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 CCDC116Q8IYX3 515 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 CHST4Q8NCG5 386 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 KCNC2Q96PR1 638 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 HHIPQ96QV1 700 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 KLF16Q9BXK1 252 aaPredicted RBP14.23□□□□□ -0.13
NDC1-201ENST00000371429 TRIM2Q9C040 744 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 A0A1W2PP18 115 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 TP53I11O14683 189 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 NR2C1P13056 603 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 RNH1P13489 461 aaKnown RBP14.23□□□□□ -0.13
NDC1-201ENST00000371429 CD1DP15813 335 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 MTTPP55157 894 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 DNAJB13P59910 316 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 PDCD10Q9BUL8 212 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 REEP4Q9H6H4 257 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 DKKL1Q9UK85 242 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 VLDLRP98155 873 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 ANKRD26P1Q6NSI1 321 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 RBM44Q6ZP01 1051 aaKnown RBP14.23□□□□□ -0.13
NDC1-201ENST00000371429 NANOGNBQ7Z5D8 188 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 TMEM135Q86UB9 458 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 RHEBL1Q8TAI7 183 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 SH3YL1Q96HL8 342 aaPredicted RBP14.23□□□□□ -0.13
NDC1-201ENST00000371429 HERPUD2Q9BSE4 406 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 SEC61A2Q9H9S3 476 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 CENPMQ9NSP4 180 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 MAN2B2Q9Y2E5 1009 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 PADI2Q9Y2J8 665 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 DAPL1A0PJW8 107 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 A6NCN8 305 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 KCNJ13O60928 360 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 ABHD18Q0P651 414 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 RASGEF1BQ0VAM2 473 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 NFE2L1Q14494 772 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 CYP27C1Q4G0S4 372 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 DENND5AQ6IQ26 1287 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 ATG14Q6ZNE5 492 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 HTR3DQ70Z44 454 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 LRCH3Q96II8 777 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 ZSWIM3Q96MP5 696 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 TRIB3Q96RU7 358 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 ZNF576Q9H609 170 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 GIMAP2Q9UG22 337 aa14.23□□□□□ -0.13
NDC1-201ENST00000371429 RPS15P62841 145 aaKnown RBP14.22□□□□□ -0.13
NDC1-201ENST00000371429 ST3GAL3Q11203 375 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 ZNF846Q147U1 533 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 LNX2Q8N448 690 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 POC5Q8NA72 575 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 OR6N1Q8NGY5 312 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 MCFD2Q8NI22 146 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 ZDHHC1Q8WTX9 485 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 RAB26Q9ULW5 256 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 SESN1Q9Y6P5 492 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 ADAM12O43184 909 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 SNX4O95219 450 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 GDI2P50395 445 aaKnown RBP14.22□□□□□ -0.13
NDC1-201ENST00000371429 DCTN2Q13561 401 aaKnown RBP14.22□□□□□ -0.13
NDC1-201ENST00000371429 KLHL22Q53GT1 634 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 CATSPEREQ5SY80 951 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 NOXRED1Q6NXP6 359 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 DNM1P34Q6PK57 102 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 UBE2J2Q8N2K1 259 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 NOX1Q9Y5S8 564 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 MYH11P35749 1972 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 HIDE1A8MVS5 230 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 ARPC2O15144 300 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 LATO43561 262 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 EDN1P05305 212 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 IL12RB1P42701 662 aa14.22□□□□□ -0.13
NDC1-201ENST00000371429 COLEC12Q5KU26 742 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms