RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ADPRHL2Q9NX46 363 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 PRKAG2Q9UGJ0 569 aa27.82■■■□□ 2.04
SSBP3-204ENST00000371320 OTOL1A6NHN0 477 aaPredicted RBP27.81■■■□□ 2.04
SSBP3-204ENST00000371320 PTGES3LE9PB15 166 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 CYP4B1P13584 511 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 RPS6KA3P51812 740 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 MAPK10P53779 464 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 MEF2AQ02078 507 aaPredicted RBP27.81■■■□□ 2.04
SSBP3-204ENST00000371320 NXPE4Q6UWF7 544 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 LRRC56Q8IYG6 542 aaPredicted RBP27.81■■■□□ 2.04
SSBP3-204ENST00000371320 C12orf76Q8N812 135 aaPredicted RBP27.81■■■□□ 2.04
SSBP3-204ENST00000371320 KIAA1958Q8N8K9 716 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 OR4K1Q8NGD4 311 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 OR2L2Q8NH16 312 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 CNIH3Q8TBE1 160 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 OR51B5Q9H339 312 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 DPEP2Q9H4A9 486 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 ATAD3AQ9NVI7 634 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 GPR34Q9UPC5 381 aa27.81■■■□□ 2.04
SSBP3-204ENST00000371320 SUV39H1O43463 412 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 POU2F2P09086 479 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 CCDC159P0C7I6 412 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 PCGF2P35227 344 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 ITGA1P56199 1179 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 GTF2IRD2BQ6EKJ0 949 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 ANGPTL8Q6UXH0 198 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 GTF2IRD2Q86UP8 949 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 C11orf65Q8NCR3 313 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 PUM2Q8TB72 1066 aaKnown RBP eCLIP27.8■■■□□ 2.047e-6■■■■□ 22
SSBP3-204ENST00000371320 NODALQ96S42 347 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 CCNA2P20248 432 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 ACADLP28330 430 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 AQP1P29972 269 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 ZNF234Q14588 700 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 FBXO46Q6PJ61 603 aaPredicted RBP27.8■■■□□ 2.04
SSBP3-204ENST00000371320 WDR48Q8TAF3 677 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 ETAA1Q9NY74 926 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 KIF17Q9P2E2 1029 aa27.8■■■□□ 2.04
SSBP3-204ENST00000371320 HEPACAM2A8MVW5 462 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 VEGFDO43915 354 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 CRATP43155 626 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 CRYBA2P53672 197 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 KEAP1Q14145 624 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 EIF4HQ15056 248 aaKnown RBP27.79■■■□□ 2.04
SSBP3-204ENST00000371320 GAB4Q2WGN9 574 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 TMEM52BQ4KMG9 183 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 FAM78AQ5JUQ0 283 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 PSRC1Q6PGN9 363 aaPredicted RBP27.79■■■□□ 2.04
SSBP3-204ENST00000371320 SFTPA1Q8IWL2 248 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 ZNF566Q969W8 418 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 ZDHHC5Q9C0B5 715 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 AP1M2Q9Y6Q5 423 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 C5orf67F2Z3F1 127 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 JRKO75564 520 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 ANGPTL1O95841 491 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 CLK3P49761 638 aaKnown RBP27.79■■■□□ 2.04
SSBP3-204ENST00000371320 PLA2G16P53816 162 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 HBA1P69905 142 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 TEAD4Q15561 434 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 GOT1L1Q8NHS2 421 aaPredicted RBP27.79■■■□□ 2.04
SSBP3-204ENST00000371320 PHOSPHO2Q8TCD6 241 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 RAB2BQ8WUD1 216 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 C7orf34Q96L11 122 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 SPNS1Q9H2V7 528 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 PAK1IP1Q9NWT1 392 aaPredicted RBP27.79■■■□□ 2.04
SSBP3-204ENST00000371320 THUMPD1Q9NXG2 353 aaKnown RBP27.79■■■□□ 2.04
SSBP3-204ENST00000371320 RAPGEFL1Q9UHV5 662 aa27.79■■■□□ 2.04
SSBP3-204ENST00000371320 KCNJ10P78508 379 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 MC1RQ01726 317 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 C2orf80Q0P641 193 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 NFATC3Q12968 1075 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 TMC5Q6UXY8 1006 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 ERN2Q76MJ5 926 aaKnown RBP27.78■■■□□ 2.04
SSBP3-204ENST00000371320 MMAAQ8IVH4 418 aaKnown RBP27.78■■■□□ 2.04
SSBP3-204ENST00000371320 ATG16L2Q8NAA4 619 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 CXorf40AQ8TE69 158 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 C16orf78Q8WTQ4 265 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 PPCDCQ96CD2 204 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 CCDC90BQ9GZT6 254 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 PLGRKTQ9HBL7 147 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 ASF1AQ9Y294 204 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 GMPPBQ9Y5P6 360 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 LRRK1Q38SD2 2015 aa27.78■■■□□ 2.04
SSBP3-204ENST00000371320 CHD7Q9P2D1 2997 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 PI15O43692 258 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 FURINP09958 794 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 ENTPD1P49961 510 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 IQCCQ4KMZ1 466 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 FAM83HQ6ZRV2 1179 aaPredicted RBP27.77■■■□□ 2.04
SSBP3-204ENST00000371320 TTC29Q8NA56 475 aaPredicted RBP27.77■■■□□ 2.04
SSBP3-204ENST00000371320 ST13P5Q8NFI4 369 aaPredicted RBP27.77■■■□□ 2.04
SSBP3-204ENST00000371320 SETD7Q8WTS6 366 aaKnown RBP27.77■■■□□ 2.04
SSBP3-204ENST00000371320 MUL1Q969V5 352 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 DGCR6LQ9BY27 220 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 TMEM245Q9H330 911 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 KRT84Q9NSB2 600 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 SPASTQ9UBP0 616 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 TMEM98Q9Y2Y6 226 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 NAALAD2Q9Y3Q0 740 aa27.77■■■□□ 2.04
SSBP3-204ENST00000371320 PRKAB1Q9Y478 270 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms