RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 A0A0A6YYC8 382 aaPredicted RBP14.1□□□□□ -0.15
COL9A1-204ENST00000370496 URADA6NGE7 173 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 ANKDD1BA6NHY2 528 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 I3L1I5 382 aaPredicted RBP14.1□□□□□ -0.15
COL9A1-204ENST00000370496 K7ENP7 123 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 CTIFO43310 598 aaKnown RBP14.1□□□□□ -0.15
COL9A1-204ENST00000370496 DLX3O60479 287 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 PLIN3O60664 434 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 PRAMEF4O60810 478 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 MYZAPP0CAP1 466 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 PRKAR1AP10644 381 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 SKP1P63208 163 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 FAM53BQ14153 422 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 HERC3Q15034 1050 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 TOR1AIP1Q5JTV8 583 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 PRAMEF9Q5VWM5 478 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 MED27Q6P2C8 311 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 INO80CQ6PI98 192 aaPredicted RBP14.1□□□□□ -0.15
COL9A1-204ENST00000370496 ZYG11AQ6WRX3 759 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 ABHD13Q7L211 337 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 IQCKQ8N0W5 287 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 MYRIPQ8NFW9 859 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 OR9A4Q8NGU2 314 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 RDH11Q8TC12 318 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 CCDC126Q96EE4 140 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 MOCOSQ96EN8 888 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 SEC16BQ96JE7 1060 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 NSUN5Q96P11 429 aaKnown RBP14.1□□□□□ -0.15
COL9A1-204ENST00000370496 TMEM237Q96Q45 408 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 YIPF2Q9BWQ6 316 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 FAM117AQ9C073 453 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 NT5DC2Q9H857 520 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 COPG2Q9UBF2 871 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 PTPRQQ9UMZ3 2332 aa14.1□□□□□ -0.15
COL9A1-204ENST00000370496 GOLGA6L10A6NI86 522 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 UGDHO60701 494 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 SPAG7O75391 227 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CREG1O75629 220 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 WFS1O76024 890 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 SUPT7LO94864 414 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CAPN1P07384 714 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 SERPINA6P08185 405 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CD63P08962 238 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 ZNF888P0CJ79 500 aaPredicted RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 HPDP32754 393 aaPredicted RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 HNF4AP41235 474 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 FOLR3P41439 243 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CASP2P42575 452 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 PRKAA2P54646 552 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 STXBP1P61764 594 aaKnown RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 PHEXP78562 749 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CDC20Q12834 499 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 DDX39BQ13838 428 aaKnown RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 DSG2Q14126 1118 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 LIPJQ5W064 366 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 RPS27LQ71UM5 84 aaKnown RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 COX15Q7KZN9 410 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 PRSS41Q7RTY9 318 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 SYVN1Q86TM6 617 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 ARHGEF39Q8N4T4 335 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 BANPQ8N9N5 519 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 OR52B6Q8NGF0 335 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 ZNF483Q8TF39 744 aaPredicted RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 REPS1Q96D71 796 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 C12orf65Q9H3J6 166 aaKnown RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 TRPC4Q9UBN4 977 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CTSFQ9UBX1 484 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 TCFL5Q9UL49 500 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 FARSAQ9Y285 508 aaKnown RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 PTRH2Q9Y3E5 179 aaKnown RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 G3V2L1 256 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 OR7A17O14581 309 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 RDH16O75452 317 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CLEC3AO75596 197 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 KLHL18O94889 574 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 NSA2O95478 260 aaKnown RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CLDN9O95484 217 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 OTCP00480 354 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 TSPAN8P19075 237 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 SERPINB1P30740 379 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 OCA2Q04671 838 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 PCDH1Q08174 1060 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 E2F2Q14209 437 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 ERV3-1Q14264 604 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CASP8Q14790 479 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CPSF6Q16630 551 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 ZNF678Q5SXM1 525 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 ADNP2Q6IQ32 1131 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 NIPAL1Q6NVV3 410 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 GPR155Q7Z3F1 870 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 ARMC2Q8NEN0 867 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CREB3L4Q8TEY5 395 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 GAL3ST3Q96A11 431 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 L3HYPDHQ96EM0 354 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 FAM111AQ96PZ2 611 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 CDK15Q96Q40 435 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 C1QTNF3Q9BXJ4 246 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 SLC6A16Q9GZN6 736 aa14.09□□□□□ -0.15
COL9A1-204ENST00000370496 STMN4Q9H169 189 aaPredicted RBP14.09□□□□□ -0.15
COL9A1-204ENST00000370496 WDR54Q9H977 334 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms