RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 TWSG1Q9GZX9 223 aa16.08■□□□□ 0.16
PHGDH-202ENST00000369409 NKX1-2Q9UD57 310 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-202ENST00000369409 MCM8Q9UJA3 840 aa16.08■□□□□ 0.16
PHGDH-202ENST00000369409 NEUROG3Q9Y4Z2 214 aa16.08■□□□□ 0.16
PHGDH-202ENST00000369409 PCDHA9Q9Y5H5 950 aa16.08■□□□□ 0.16
PHGDH-202ENST00000369409 FAM221BA6H8Z2 402 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 RTCAO00442 366 aaKnown RBP16.07■□□□□ 0.16
PHGDH-202ENST00000369409 LAMTOR5O43504 91 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 SDC3O75056 442 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 CLEC3AO75596 197 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 TDGF1P13385 188 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 HRH2P25021 359 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 GRIA3P42263 894 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 C21orf58P58505 322 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 HNRNPKP61978 463 aaKnown RBP eCLIP16.07■□□□□ 0.163e-7■□□□□ 8.5
PHGDH-202ENST00000369409 MS4A2Q01362 244 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 SRSF5Q13243 272 aaKnown RBP16.07■□□□□ 0.16
PHGDH-202ENST00000369409 NANOGP8Q6NSW7 305 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 TMEM26Q6ZUK4 368 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 PAQR7Q86WK9 346 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 TBC1D19Q8N5T2 526 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 CREB3L4Q8TEY5 395 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 STARD8Q92502 1023 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 JADE3Q92613 823 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 ASB9Q96DX5 294 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 CGREF1Q99674 301 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 ZNF717Q9BY31 904 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-202ENST00000369409 REXO4Q9GZR2 422 aaKnown RBP16.07■□□□□ 0.16
PHGDH-202ENST00000369409 DCLRE1BQ9H816 532 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 NANOGQ9H9S0 305 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 AHSPQ9NZD4 102 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 SNX7Q9UNH6 387 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 L3MBTL1Q9Y468 752 aa16.07■□□□□ 0.16
PHGDH-202ENST00000369409 C15orf38-AP3S2A0A0A6YYH1 394 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 YY2O15391 372 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 ZW10O43264 779 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 AQP9O43315 295 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 DFNA5O60443 496 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 LMNAP02545 664 aaKnown RBP16.06■□□□□ 0.16
PHGDH-202ENST00000369409 MAGP20916 626 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 ARPINQ7Z6K5 226 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 WDR5BQ86VZ2 330 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 NELL1Q92832 810 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 PCDHAC1Q9H158 963 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 RMND5AQ9H871 391 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 SYNPO2LQ9H987 977 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 SERHLQ9NQF3 203 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 VAPAQ9P0L0 249 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 PCDHGA4Q9Y5G9 962 aa16.06■□□□□ 0.16
PHGDH-202ENST00000369409 C2orf74A8MZ97 194 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 KLHL18O94889 574 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 TPP2P29144 1249 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 DHPSP49366 369 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 MTPNP58546 118 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 SRSF11Q05519 484 aaKnown RBP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 TRIM25Q14258 630 aaKnown RBP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 DEFB133Q30KQ1 61 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 PRR23BQ6ZRT6 265 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 RBM12BQ8IXT5 1001 aaKnown RBP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 TMEM132CQ8N3T6 1108 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 ENDOVQ8N8Q3 282 aaKnown RBP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 BHLHE22Q8NFJ8 381 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 SLC26A7Q8TE54 656 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 C16orf78Q8WTQ4 265 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 ITCHQ96J02 903 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 CENPKQ9BS16 269 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 SARGQ9BW04 601 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 AICDAQ9GZX7 198 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 HRASLS2Q9NWW9 162 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 MAN2B2Q9Y2E5 1009 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 BTBD3Q9Y2F9 522 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 AP1M2Q9Y6Q5 423 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 MUC3AQ02505 3323 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 NUP214P35658 2090 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 A0A1B0GVT2 93 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 ACOT8O14734 319 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 LAMP1P11279 417 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 PIM1P11309 404 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 GSTM2P28161 218 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 BSGP35613 385 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 AHRP35869 848 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 TAS2R50P59544 299 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 SELPLGQ14242 412 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 GTDC1Q4AE62 458 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 TJAP1Q5JTD0 557 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 LYSMD4Q5XG99 296 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 SPESP1Q6UW49 350 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 MSANTD1Q6ZTZ1 278 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 NUDT13Q86X67 352 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 MFSD9Q8NBP5 474 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 OR8J2Q8NGG1 315 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.05■□□□□ 0.16
PHGDH-202ENST00000369409 RSC1A1Q92681 617 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 RGMAQ96B86 450 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 MACROD1Q9BQ69 325 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 INPP5KQ9BT40 448 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 LHX9Q9NQ69 397 aa16.05■□□□□ 0.16
PHGDH-202ENST00000369409 SLC6A13Q9NSD5 602 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms