RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 C10orf53Q8N6V4 93 aa10.11□□□□□ -0.79
PRDM1-201ENST00000369089 GPRC5AQ8NFJ5 357 aa10.11□□□□□ -0.79
PRDM1-201ENST00000369089 PXT1Q8NFP0 134 aa10.11□□□□□ -0.79
PRDM1-201ENST00000369089 OR10K1Q8NGX5 313 aa10.11□□□□□ -0.79
PRDM1-201ENST00000369089 CPNE2Q96FN4 548 aaPredicted RBP10.11□□□□□ -0.79
PRDM1-201ENST00000369089 VRK1Q99986 396 aaPredicted RBP10.11□□□□□ -0.79
PRDM1-201ENST00000369089 PTDSS2Q9BVG9 487 aa10.11□□□□□ -0.79
PRDM1-201ENST00000369089 TMPRSS5Q9H3S3 457 aa10.11□□□□□ -0.79
PRDM1-201ENST00000369089 SLC28A3Q9HAS3 691 aa10.11□□□□□ -0.79
PRDM1-201ENST00000369089 ZFP57Q9NU63 452 aa10.11□□□□□ -0.79
PRDM1-201ENST00000369089 TCRBV7S3A2A0A539 114 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 RRN3P2A6NIE6 340 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 E7ESA3 106 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 ACOT8O14734 319 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 EEF1E1O43324 174 aaKnown RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 ARIH2O95376 493 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 ADH1AP07327 375 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 HMBSP08397 361 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 HOXB8P17481 243 aaPredicted RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 GEMP55040 296 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 TSTA3Q13630 321 aaPredicted RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 SNTB1Q13884 538 aaKnown RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 INTS6LQ5JSJ4 861 aaKnown RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 CATSPEREQ5SY80 951 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 SYT6Q5T7P8 510 aaPredicted RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 LIPIQ6XZB0 460 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 ANKS3Q6ZW76 656 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 MARCH9Q86YJ5 346 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 FSTL5Q8N475 847 aaPredicted RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 LIX1Q8N485 282 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 SLC38A2Q96QD8 506 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 ACOX2Q99424 681 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 NT5C1AQ9BXI3 368 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 POPDC2Q9HBU9 364 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 SLCO3A1Q9UIG8 710 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 CNTN6Q9UQ52 1028 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 LCHNA4D1U4 455 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 CCDC85CA6NKD9 419 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 OGTO15294 1046 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 ENTPD6O75354 484 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 INHBBP09529 407 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 HTR1EP28566 365 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 MECP2P51608 486 aaKnown RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 KCNQ1P51787 676 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 CEBPGP53567 150 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 KYAT1Q16773 422 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 C4orf46Q504U0 113 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 EFCAB12Q6NXP0 572 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 LINGO2Q7L985 606 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 TSPYL5Q86VY4 417 aaPredicted RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 OR10H5Q8NGA6 315 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 OR14K1Q8NGZ2 314 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 TAAR8Q969N4 342 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 PKMYT1Q99640 499 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 TOLLIPQ9H0E2 274 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 OR51M1Q9H341 326 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 PXMP2Q9NR77 195 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 AJAP1Q9UKB5 411 aaPredicted RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 DNMT3AQ9Y6K1 912 aaPredicted RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 CARNS1A5YM72 827 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 SSX4O60224 188 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 URODP06132 367 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 RRASP10301 218 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 ARF4P18085 180 aaPredicted RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 CRATP43155 626 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 FCGRTP55899 365 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 SNRPEP62304 92 aaKnown RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 RBP5P82980 135 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 TATDN1Q6P1N9 297 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 OTOP1Q7RTM1 612 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 C4orf19Q8IY42 314 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 ATP6V1C2Q8NEY4 427 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 PIWIL1Q96J94 861 aaKnown RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 PRKD2Q9BZL6 878 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 SLC22A11Q9NSA0 550 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 A0A1W2PP18 115 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 AFF3P51826 1226 aaKnown RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 RSU1Q15404 277 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 GSG1LQ6UXU4 331 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 TPGS1Q6ZTW0 290 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 USP51Q70EK9 711 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 SNIP1Q8TAD8 396 aaKnown RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 SFXN2Q96NB2 322 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 KCNC2Q96PR1 638 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 OR52E6Q96RD3 313 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 ADARB2Q9NS39 739 aaKnown RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 DUS2Q9NX74 493 aaKnown RBP10.1□□□□□ -0.79
PRDM1-201ENST00000369089 CNTN3Q9P232 1028 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 ARHGAP28Q9P2N2 729 aa10.1□□□□□ -0.79
PRDM1-201ENST00000369089 FAM234BA2RU67 622 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 OR7A17O14581 309 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 PRAF2O60831 178 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 LILRB5O75023 590 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 LY86O95711 162 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SFTPCP11686 197 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SOAT1P35610 550 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 GLUD2P49448 558 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 MAT1AQ00266 395 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SNTB2Q13425 540 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 ZNF674Q2M3X9 581 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms