RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 ISM1B1AKI9 464 aa13.27□□□□□ -0.28
SHC1-202ENST00000368445 NPC1O15118 1278 aa13.27□□□□□ -0.28
SHC1-202ENST00000368445 ERAL1O75616 437 aaKnown RBP13.27□□□□□ -0.28
SHC1-202ENST00000368445 KDELR2P33947 212 aa13.27□□□□□ -0.28
SHC1-202ENST00000368445 GPC1P35052 558 aa13.27□□□□□ -0.28
SHC1-202ENST00000368445 MANFP55145 182 aaKnown RBP13.27□□□□□ -0.28
SHC1-202ENST00000368445 ARL10Q8N8L6 244 aa13.27□□□□□ -0.28
SHC1-202ENST00000368445 SMYD1Q8NB12 490 aa13.27□□□□□ -0.28
SHC1-202ENST00000368445 TMEM145Q8NBT3 493 aa13.27□□□□□ -0.28
SHC1-202ENST00000368445 UBE2E3Q969T4 207 aa13.27□□□□□ -0.28
SHC1-202ENST00000368445 SPATA6Q9NWH7 488 aaPredicted RBP13.27□□□□□ -0.28
SHC1-202ENST00000368445 PDP1Q9P0J1 537 aaPredicted RBP13.27□□□□□ -0.28
SHC1-202ENST00000368445 GPR34Q9UPC5 381 aa13.27□□□□□ -0.28
SHC1-202ENST00000368445 KMOO15229 486 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 SUV39H1O43463 412 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 CCNDBP1O95273 360 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 LAMP2P13473 410 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 MRPL19P49406 292 aaKnown RBP13.27□□□□□ -0.29
SHC1-202ENST00000368445 RPS26P62854 115 aaKnown RBP13.27□□□□□ -0.29
SHC1-202ENST00000368445 PIGFQ07326 219 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 TNFAIP8L2Q6P589 184 aaPredicted RBP13.27□□□□□ -0.29
SHC1-202ENST00000368445 NLRP8Q86W28 1048 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 REEP4Q9H6H4 257 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 NTN4Q9HB63 628 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 DMRT3Q9NQL9 472 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 DZANK1Q9NVP4 752 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 ADPRHL2Q9NX46 363 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 AASSQ9UDR5 926 aa13.27□□□□□ -0.29
SHC1-202ENST00000368445 A0A1W2PRB8 838 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 C5orf58C9J3I9 102 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 H0YJX3 145 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 NOL3O60936 208 aaKnown RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 MITFO75030 526 aaPredicted RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 RAD23AP54725 363 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 HBA1P69905 142 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 DLX2Q07687 328 aaPredicted RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 TP53BP2Q13625 1128 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 BCL7AQ4VC05 210 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 CYBRD1Q53TN4 286 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 ZNF776Q68DI1 518 aaPredicted RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 SIPA1Q96FS4 1042 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 HSH2DQ96JZ2 352 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 DPEP2Q9H4A9 486 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 REEP1Q9H902 201 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 RPS6KA6Q9UK32 745 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 TESMINQ9Y4I5 508 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 PCDHB11Q9Y5F2 797 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 TRANK1O15050 2925 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 MTCL1Q9Y4B5 1905 aaKnown RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 KLF8O95600 359 aaPredicted RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 ALPPL2P10696 532 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 IDSP22304 550 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 KCNAB2Q13303 367 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 MEP1AQ16819 746 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 ZNF852Q6ZMS4 543 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 PDZD3Q86UT5 571 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 RNF130Q86XS8 419 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 DNAJB8Q8NHS0 232 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 SLC17A9Q9BYT1 436 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 RASSF1Q9NS23 344 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 ASIC5Q9NY37 505 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 TRPC4Q9UBN4 977 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 C3orf18Q9UK00 162 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 ZNF451Q9Y4E5 1061 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 FAM220BPB1ANY3 271 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 CACNB4O00305 520 aaPredicted RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 PAPLNO95428 1278 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 FABP3P05413 133 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 PTX3P26022 381 aaPredicted RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 DPTQ07507 201 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 SLC36A3Q495N2 470 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 TMEM52BQ4KMG9 183 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 GPR107Q5VW38 600 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 ENPP7Q6UWV6 458 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 RIMKLAQ8IXN7 391 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 PARP8Q8N3A8 854 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 C11orf65Q8NCR3 313 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 C16orf78Q8WTQ4 265 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 OTUB1Q96FW1 271 aaPredicted RBP13.26□□□□□ -0.29
SHC1-202ENST00000368445 DGCR6LQ9BY27 220 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 PRDM8Q9NQV8 689 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 ABCG2Q9UNQ0 655 aa13.26□□□□□ -0.29
SHC1-202ENST00000368445 DNAH14Q0VDD8 3507 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 MAN1A2O60476 641 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 KCNK5O95279 499 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 GRK3P35626 688 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 SSR2P43308 183 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 SKIV2LQ15477 1246 aaKnown RBP13.25□□□□□ -0.29
SHC1-202ENST00000368445 AGBL4Q5VU57 503 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 TTC23Q5W5X9 447 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 ANKRD54Q6NXT1 300 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 R3HCC1LQ7Z5L2 792 aaKnown RBP13.25□□□□□ -0.29
SHC1-202ENST00000368445 SPRED1Q7Z699 444 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 PATL1Q86TB9 770 aaKnown RBP13.25□□□□□ -0.29
SHC1-202ENST00000368445 MFSD2AQ8NA29 543 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 RBM4BQ9BQ04 359 aaKnown RBP13.25□□□□□ -0.29
SHC1-202ENST00000368445 C17orf62Q9BQA9 187 aa13.25□□□□□ -0.29
SHC1-202ENST00000368445 RBM4Q9BWF3 364 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms