RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 FUNDC2Q9BWH2 189 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 ELAC1Q9H777 363 aaKnown RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 SP140LQ9H930 580 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 IL17CQ9P0M4 197 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 A0A1B0GVG6 124 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 GTPBP1O00178 669 aaKnown RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 MITFO75030 526 aaPredicted RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 DHFRP00374 187 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 ATXN1LP0C7T5 689 aaKnown RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 SLC6A4P31645 630 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 CCT3P49368 545 aaKnown RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 PCDH1Q08174 1060 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 ZNF311Q5JNZ3 666 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 PEX5LQ8IYB4 626 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 CADM2Q8N3J6 435 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 OR9A1PQ8NGU1 263 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 MAGIXQ9H6Y5 334 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 NKIRAS2Q9NYR9 191 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 GPC6Q9Y625 555 aaPredicted RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 CHURC1-FNTBB4DL54 471 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 SLC16A5O15375 505 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 KHDRBS3O75525 346 aaKnown RBP11.29□□□□□ -0.6
COPA-202ENST00000368069 HSD17B2P37059 387 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 DOC2AQ14183 400 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 RANBP3LQ86VV4 465 aaPredicted RBP11.29□□□□□ -0.6
COPA-202ENST00000368069 IL1RAPQ9NPH3 570 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 DNAJC27Q9NZQ0 273 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 H0YC42 278 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 ERI3O43414 337 aaKnown RBP11.29□□□□□ -0.6
COPA-202ENST00000368069 RASGRP1O95267 797 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 VIPP01282 170 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 CPN2P22792 545 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 S100A1P23297 94 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 PSMA3P25788 255 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 RPL10P27635 214 aaKnown RBP11.29□□□□□ -0.6
COPA-202ENST00000368069 GSTM2P28161 218 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 BNC1Q01954 994 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 KIAA1161Q6NSJ0 714 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 C17orf99Q6UX52 265 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 VTCN1Q7Z7D3 282 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 LRRTM4Q86VH4 590 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 RETREG3Q86VR2 466 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 COMMD2Q86X83 199 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 FRS2Q8WU20 508 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 RAB8BQ92930 207 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 ISL2Q96A47 359 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 ARMC5Q96C12 935 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 UBXN10Q96LJ8 280 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 MCUBQ9NWR8 336 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 GMPR2Q9P2T1 348 aaKnown RBP11.29□□□□□ -0.6
COPA-202ENST00000368069 MRPS33Q9Y291 106 aaKnown RBP11.29□□□□□ -0.6
COPA-202ENST00000368069 TMEM98Q9Y2Y6 226 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 PCDHB14Q9Y5E9 798 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 GPR39O43194 453 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 DNAJB5O75953 348 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 CSNK2A2P19784 350 aaPredicted RBP11.29□□□□□ -0.6
COPA-202ENST00000368069 RYKP34925 604 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 RCVRNP35243 200 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 RGRP47804 291 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 SEC13P55735 322 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 GABARAPL2P60520 117 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 CD47Q08722 323 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 CDH24Q86UP0 819 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 NATD1Q8N6N6 113 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 POMGNT2Q8NAT1 580 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 OR10H4Q8NGA5 316 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 SMPDL3AQ92484 453 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 GFM1Q96RP9 751 aaKnown RBP11.29□□□□□ -0.6
COPA-202ENST00000368069 FAM129BQ96TA1 746 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 DOHHQ9BU89 302 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 NPLQ9BXD5 320 aaPredicted RBP11.29□□□□□ -0.6
COPA-202ENST00000368069 OR51V1Q9H2C8 321 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 WDR26Q9H7D7 661 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 TRPV5Q9NQA5 729 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 MS4A12Q9NXJ0 267 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 VAPAQ9P0L0 249 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 SLCO3A1Q9UIG8 710 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 PCDHB11Q9Y5F2 797 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 PMF1-BGLAPU3KQ54 211 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 PHIPQ8WWQ0 1821 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 CPSF4LA6NMK7 179 aaKnown RBP11.29□□□□□ -0.6
COPA-202ENST00000368069 RB1P06400 928 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 TIA1P31483 386 aaKnown RBP eCLIP11.29□□□□□ -0.61e-7■■■□□ 14.7
COPA-202ENST00000368069 BCAP31P51572 246 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 RAB25P57735 213 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 LRRC32Q14392 662 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 REEP3Q6NUK4 255 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 GALNT7Q86SF2 657 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 CLECL1Q8IZS7 167 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 NETO1Q8TDF5 533 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 CAMK1GQ96NX5 476 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 LHPPQ9H008 270 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 IL26Q9NPH9 171 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 CEPT1Q9Y6K0 416 aa11.29□□□□□ -0.6
COPA-202ENST00000368069 A0A0J9YVX5 310 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 C7orf72A4D263 438 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 LRRC72A6NJI9 287 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 TLX2O43763 284 aaPredicted RBP11.28□□□□□ -0.6
COPA-202ENST00000368069 TFAP2AP05549 437 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 HLA-EP13747 358 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms