RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 RBM48Q5RL73 367 aaKnown RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 THEMIS2Q5TEJ8 643 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 CWF19L1Q69YN2 538 aaKnown RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 GPR141Q7Z602 305 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 C11orf96Q7Z7L8 435 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 HEATR4Q86WZ0 1026 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 ZDHHC21Q8IVQ6 265 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 ZZZ3Q8IYH5 903 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 FAM86B1Q8N7N1 296 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 CDC26Q8NHZ8 85 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 CHFRQ96EP1 664 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 NRBF2Q96F24 287 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 MSANTD3Q96H12 275 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 ZDHHC5Q9C0B5 715 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 GABARAPL1Q9H0R8 117 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 ING2Q9H160 280 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 RSPH9Q9H1X1 276 aaPredicted RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 C8orf33Q9H7E9 229 aaPredicted RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 FBRSQ9HAH7 460 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 TM9SF3Q9HD45 589 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 IL1RAPQ9NPH3 570 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 PRDM6Q9NQX0 595 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 RSL24D1Q9UHA3 163 aaKnown RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 ACSL5Q9ULC5 683 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 NCOR1O75376 2440 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 TRPM6Q9BX84 2022 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 TICRRQ7Z2Z1 1910 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 NUMA1Q14980 2115 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 KCNJ13O60928 360 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 SEMA3DO95025 777 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 CPSF4O95639 269 aaKnown RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 LAMP1P11279 417 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 SRFP11831 508 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 CDH2P19022 906 aaPredicted RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 IDSP22304 550 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 KDELR2P33947 212 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 CDK9P50750 372 aaKnown RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 ZP2Q05996 745 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 RBBP4Q09028 425 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 TOP3AQ13472 1001 aaPredicted RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 PDE7AQ13946 482 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 CST6Q15828 149 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 HKDC1Q2TB90 917 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 SHQ1Q6PI26 577 aaKnown RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 TMIGD1Q6UXZ0 262 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 EIF3MQ7L2H7 374 aaKnown RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 COMMD6Q7Z4G1 85 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 THAP5Q7Z6K1 395 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 METTL4Q8N3J2 472 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 RNF175Q8N4F7 328 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 SPDYE1Q8NFV5 336 aaPredicted RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 OR5K2Q8NHB8 316 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 SH3KBP1Q96B97 665 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 FBXL20Q96IG2 436 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 TUBA1CQ9BQE3 449 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 CARS2Q9HA77 564 aaKnown RBP13.47□□□□□ -0.25
USF1-202ENST00000368020 ADPRHL2Q9NX46 363 aa13.47□□□□□ -0.25
USF1-202ENST00000368020 C1orf226A1L170 272 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 OR6B1O95007 311 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 ETHE1O95571 254 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 FABP3P05413 133 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 CALRP27797 417 aaKnown RBP13.46□□□□□ -0.25
USF1-202ENST00000368020 CTHP32929 405 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 PCGF2P35227 344 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 DCTP40126 519 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 HLCSP50747 726 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 FADDQ13158 208 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 TSTA3Q13630 321 aaPredicted RBP13.46□□□□□ -0.25
USF1-202ENST00000368020 NKG7Q16617 165 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 ZBED5Q49AG3 693 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 TMEM259Q4ZIN3 620 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 CATSPEREQ5SY80 951 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 METRNLQ641Q3 311 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 NAIF1Q69YI7 327 aaPredicted RBP13.46□□□□□ -0.25
USF1-202ENST00000368020 TBPL2Q6SJ96 375 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 SPESP1Q6UW49 350 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 CBLL1Q75N03 491 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 PAGE2Q7Z2X7 111 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 PIWIL3Q7Z3Z3 882 aaKnown RBP13.46□□□□□ -0.25
USF1-202ENST00000368020 C17orf64Q86WR6 236 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 SLC30A8Q8IWU4 369 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 SYNPOQ8N3V7 929 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 C11orf65Q8NCR3 313 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.46□□□□□ -0.252e-6■■■■■ 33
USF1-202ENST00000368020 TFGQ92734 400 aaPredicted RBP13.46□□□□□ -0.25
USF1-202ENST00000368020 FOXJ1Q92949 421 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 PPCDCQ96CD2 204 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 QRFPRQ96P65 431 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 AIF1LQ9BQI0 150 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 RAB11FIP5Q9BXF6 653 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 C1QTNF7Q9BXJ2 289 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 TEX101Q9BY14 249 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 TRIT1Q9H3H1 467 aaKnown RBP13.46□□□□□ -0.25
USF1-202ENST00000368020 RMI1Q9H9A7 625 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 STON1Q9Y6Q2 735 aa13.46□□□□□ -0.25
USF1-202ENST00000368020 COL4A2P08572 1712 aa13.46□□□□□ -0.26
USF1-202ENST00000368020 UNC80Q8N2C7 3258 aa13.46□□□□□ -0.26
USF1-202ENST00000368020 MYOCOSA0A1B0GUC4 107 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 ZNF682O95780 498 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms