RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 DUSP10Q9Y6W6 482 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 KIAA1549Q9HCM3 1950 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 HSPB2A8KAH6 182 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 F8W8V4 182 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 RDH16O75452 317 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 GLSO94925 669 aaPredicted RBP13.63□□□□□ -0.23
VAMP4-202ENST00000367740 SERPING1P05155 500 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 TPH1P17752 444 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 RELAQ04206 551 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 PRPSAP1Q14558 356 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 HSPB2Q16082 182 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 ICE2Q659A1 982 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 POMZP3Q6PJE2 187 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 RGS9BPQ6ZS82 235 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 VN1R4Q7Z5H5 301 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 PDSS2Q86YH6 399 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 TMEM156Q8N614 296 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 MCOLN3Q8TDD5 553 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 CTNNBL1Q8WYA6 563 aaPredicted RBP13.63□□□□□ -0.23
VAMP4-202ENST00000367740 YIPF4Q9BSR8 244 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 TSSK1BQ9BXA7 367 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 TIMMDC1Q9NPL8 285 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 TRMT1Q9NXH9 659 aaKnown RBP13.63□□□□□ -0.23
VAMP4-202ENST00000367740 DDX56Q9NY93 547 aaKnown RBP13.63□□□□□ -0.23
VAMP4-202ENST00000367740 KCMF1Q9P0J7 381 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 TAC3Q9UHF0 121 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 ACAD8Q9UKU7 415 aa13.63□□□□□ -0.23
VAMP4-202ENST00000367740 NCKAP5O14513 1909 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 MROH6A6NGR9 719 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 SAGE2PA6NJ88 616 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 DVL2O14641 736 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 CELA3AP09093 270 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 TNNT1P13805 278 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 RPA3P35244 121 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-202ENST00000367740 CCNFP41002 786 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 MAGEA5P43359 124 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 PRDX1Q06830 199 aaKnown RBP13.62□□□□□ -0.23
VAMP4-202ENST00000367740 TMED2Q15363 201 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 ANKRD20A2Q5SQ80 823 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 ANKRD20A1Q5TYW2 823 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 ANKRD20A3Q5VUR7 823 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 TMEM214Q6NUQ4 689 aaKnown RBP13.62□□□□□ -0.23
VAMP4-202ENST00000367740 SLC22A16Q86VW1 577 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 CCDC50Q8IVM0 306 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 KLHDC8BQ8IXV7 354 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 NFAM1Q8NET5 270 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-202ENST00000367740 SKA2Q8WVK7 121 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-202ENST00000367740 PEX11GQ96HA9 241 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 CCDC138Q96M89 665 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 OR1F2PQ96R84 312 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 MACROD1Q9BQ69 325 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 DEFB126Q9BYW3 111 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 MTRF1LQ9UGC7 380 aaKnown RBP13.62□□□□□ -0.23
VAMP4-202ENST00000367740 MRFAP1Q9Y605 127 aa13.62□□□□□ -0.23
VAMP4-202ENST00000367740 ITGA10O75578 1167 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 ENDOUP21128 410 aaKnown RBP13.61□□□□□ -0.23
VAMP4-202ENST00000367740 SORDQ00796 357 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 SEMA3AQ14563 771 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.61□□□□□ -0.23
VAMP4-202ENST00000367740 WLSQ5T9L3 541 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 ADCK2Q7Z695 626 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 FAM109AQ8N4B1 249 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 TMEM251Q8N6I4 163 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 OR13J1Q8NGT2 312 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 ZCCHC10Q8TBK6 192 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 SMPDL3AQ92484 453 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 SYN2Q92777 582 aaPredicted RBP13.61□□□□□ -0.23
VAMP4-202ENST00000367740 KIAA1191Q96A73 305 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 PERPQ96FX8 193 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 SECISBP2Q96T21 854 aaKnown RBP13.61□□□□□ -0.23
VAMP4-202ENST00000367740 PIH1D1Q9NWS0 290 aaKnown RBP13.61□□□□□ -0.23
VAMP4-202ENST00000367740 ALKBH4Q9NXW9 302 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 UTP6Q9NYH9 597 aaKnown RBP13.61□□□□□ -0.23
VAMP4-202ENST00000367740 CHMP5Q9NZZ3 219 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 HYOU1Q9Y4L1 999 aa13.61□□□□□ -0.23
VAMP4-202ENST00000367740 RAI1Q7Z5J4 1906 aaPredicted RBP13.6□□□□□ -0.23
VAMP4-202ENST00000367740 hCG_1818297A0A087WSY0 165 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 MBD3L4A6NDZ8 208 aaPredicted RBP13.6□□□□□ -0.23
VAMP4-202ENST00000367740 ZNF860A6NHJ4 632 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 MBD3L5A6NJ08 208 aaPredicted RBP13.6□□□□□ -0.23
VAMP4-202ENST00000367740 G3V3Y1 287 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 H7C0C1 242 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 SUSD5O60279 629 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 CNOT4O95628 575 aaKnown RBP13.6□□□□□ -0.23
VAMP4-202ENST00000367740 IFNA2P01563 188 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 GABRA1P14867 456 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 ATP5OP48047 213 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 MAN2A2P49641 1150 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 TSTA3Q13630 321 aaPredicted RBP13.6□□□□□ -0.23
VAMP4-202ENST00000367740 NDUFAF5Q5TEU4 345 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 KCTD11Q693B1 232 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 KIAA0408Q6ZU52 694 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 KIF18BQ86Y91 864 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 CYP4X1Q8N118 509 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 APCDD1LQ8NCL9 501 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 TNIP2Q8NFZ5 429 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 OR5T3Q8NGG3 340 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 GSDMBQ8TAX9 411 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 PIGTQ969N2 578 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 SARAFQ96BY9 339 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms