RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 C20orf202A1L168 122 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 OR6C70A6NIJ9 312 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 DEDDO75618 318 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PAHP00439 452 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 GIPP09681 153 aaPredicted RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PERM1Q5SV97 790 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PTRH1Q86Y79 214 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 TICAM1Q8IUC6 712 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PRSS58Q8IYP2 241 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 OR4F6Q8NGB9 312 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 KAT5Q92993 513 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 RANBP9Q96S59 729 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 CNPPD1Q9BV87 410 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ZFYVE28Q9HCC9 887 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM161AQ9NX61 479 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 LUZP4Q9P127 313 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 C5orf52A6NGY3 159 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 MATN3O15232 486 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 EEDO75530 441 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 OAS1P00973 400 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SNRNP70P08621 437 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 CCR7P32248 378 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PLA1AQ53H76 456 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 GAB3Q8WWW8 586 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PANX1Q96RD7 426 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ACE2Q9BYF1 805 aaPredicted RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ALX4Q9H161 411 aaPredicted RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PDYNP01213 254 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 OPN1LWP04000 364 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SHBGP04278 402 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ICAM1P05362 532 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 TYRP1P17643 537 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 KDELR1P24390 212 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SCAPQ12770 1279 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 MTMR1Q13613 665 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 CCINQ13939 588 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SWI5Q1ZZU3 235 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 TLDC1Q6P9B6 456 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ENPP7Q6UWV6 458 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 DPPA3Q6W0C5 159 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 IL34Q6ZMJ4 242 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 MCOLN2Q8IZK6 566 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 DUSP19Q8WTR2 217 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 FLRT1Q9NZU1 646 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 NOSIPQ9Y314 301 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 MROH1Q8NDA8 1641 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ADGBQ8N7X0 1667 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ELOVL7A1L3X0 281 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 LIASO43766 372 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 UBL3O95164 117 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 IFNA6P05013 189 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ERVK-10P10266 1014 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SLC6A2P23975 617 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 EFCAB12Q6NXP0 572 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PRSS55Q6UWB4 352 aaPredicted RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 TAS1R2Q8TE23 839 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PIGBQ92521 554 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 OXSMQ9NWU1 459 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PLA2G4CQ9UP65 541 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 USP3Q9Y6I4 520 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 OGTO15294 1046 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 LIPEQ05469 1076 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 CAPSQ13938 189 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF345Q14585 488 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 RNASE12Q5GAN4 147 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 USP45Q70EL2 814 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 NANOS1Q8WY41 292 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 KCNA7Q96RP8 456 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 FAM126AQ9BYI3 521 aaPredicted RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 DKKL1Q9UK85 242 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 DPPA5A6NC42 116 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ALDH3B2P48448 385 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 LASP1Q14847 261 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ELFN2Q5R3F8 820 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PRICKLE2Q7Z3G6 844 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 LIMS2Q7Z4I7 341 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 OR6V1Q8N148 313 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 KLHDC1Q8N7A1 406 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 BBS10Q8TAM1 723 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 MAFIPQ8WZ33 124 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 LRCH3Q96II8 777 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 F2RL3Q96RI0 385 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 RUSC1Q9BVN2 902 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 LIN28AQ9H9Z2 209 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SNX15Q9NRS6 342 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ZNRF3Q9ULT6 936 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 FAM185AQ8N0U4 392 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 LURAP1Q96LR2 239 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 MTG2Q9H4K7 406 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 NGRNQ9NPE2 291 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 TBX20Q9UMR3 447 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SCAMP3O14828 347 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ALDH1A2O94788 518 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 TPT1P13693 172 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SPI1P17947 270 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ZNHIT3Q15649 155 aaPredicted RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 UGT8Q16880 541 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 RANBP3LQ86VV4 465 aaPredicted RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 IFNL1Q8IU54 200 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 CNTN4Q8IWV2 1026 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms