RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 COX7A2P14406 83 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 HIST1H2ADP20671 130 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ZP3P21754 424 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 EPHA8P29322 1005 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 RPL9P32969 192 aaKnown RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 MSH2P43246 934 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 TM4SF4P48230 202 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 MNAT1P51948 309 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 PRKAA2P54646 552 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ACTR2P61160 394 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 TIMM10P62072 90 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ACTA2P62736 377 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ACTC1P68032 377 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ACTA1P68133 377 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ROR1Q01973 937 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 RASGEF1BQ0VAM2 473 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 PNRC1Q12796 327 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 EXT1Q16394 746 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 PHKG1Q16816 387 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 PPP1R3AQ16821 1122 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ALG11Q2TAA5 492 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 QRICH1Q2TAL8 776 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 GFOD2Q3B7J2 385 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 FAM106AQ4KMX7 169 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 CXorf66Q5JRM2 361 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 SLC10A5Q5PT55 438 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 GCNT7Q6ZNI0 430 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 SEPT14Q6ZU15 432 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 SLC24A5Q71RS6 500 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 DET1Q7L5Y6 550 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 HIST3H2AQ7L7L0 130 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 TMEM135Q86UB9 458 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 AACSQ86V21 672 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 TBC1D10CQ8IV04 446 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 CEP97Q8IW35 865 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 RNF168Q8IYW5 571 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ZNF527Q8NB42 609 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 NPEPL1Q8NDH3 523 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 MDS2Q8NDY4 140 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 OR6X1Q8NH79 312 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 MOSPD2Q8NHP6 518 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 TRPC4APQ8TEL6 797 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 RUBCNQ92622 972 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 SGCDQ92629 289 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 FRZBQ92765 325 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 HDAC2Q92769 488 aaKnown RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 KLHL15Q96M94 604 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 SEPT5Q99719 369 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 HSD17B14Q9BPX1 270 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 LZTS2Q9BRK4 669 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 BTBD10Q9BSF8 475 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 HGH1Q9BTY7 390 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 INTS2Q9H0H0 1204 aaKnown RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 EHD1Q9H4M9 534 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 WDR41Q9HAD4 459 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 SMC4Q9NTJ3 1288 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 DUS2Q9NX74 493 aaKnown RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 OPN4Q9UHM6 478 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 TSPYL4Q9UJ04 414 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 LEF1Q9UJU2 399 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 CDC23Q9UJX2 597 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 TBX21Q9UL17 535 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ZNF346Q9UL40 294 aaKnown RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 PNMA2Q9UL42 364 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 SCML2Q9UQR0 700 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ZNF148Q9UQR1 794 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 ZNF337Q9Y3M9 751 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 FLVCR1Q9Y5Y0 555 aa-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 TNKS1BP1Q9C0C2 1729 aaKnown RBP-0.27□□□□□ -2.45
RNU6-54P-201ENST00000365563 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 GPR179Q6PRD1 2367 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 FRMD3A2A2Y4 597 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 GSAPA4D1B5 854 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 IGLON5A6NGN9 336 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 EFCAB7A8K855 629 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 H3BQ06 376 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 ARPC2O15144 300 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 RIPK2O43353 540 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 ECE2O60344 883 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 CYTIPO60759 359 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 WDPCPO95876 746 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 GH2P01242 217 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 HOXB7P09629 217 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 NBPF7P0C2Y1 421 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 ACTN1P12814 892 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 ADRB3P13945 408 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 CCNCP24863 283 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 TIA1P31483 386 aaKnown RBP eCLIP-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 ACVR1BP36896 505 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 ALDH3B1P43353 468 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 IER3P46695 156 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 SLC1A6P48664 564 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 NT5C2P49902 561 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 GPM6AP51674 278 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 ZNF131P52739 623 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 RPS8P62241 208 aaKnown RBP-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 LMOD3Q0VAK6 560 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 PRKG2Q13237 762 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 ASAH1Q13510 395 aa-0.28□□□□□ -2.45
RNU6-54P-201ENST00000365563 SERTAD2Q14140 314 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms