RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 FGF4P08620 206 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 CD63P08962 238 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 CCNYL3P0C7X3 344 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 PIM1P11309 404 aaPredicted RBP13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 RORAP35398 523 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 KRT6CP48668 564 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 WDR4P57081 412 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 PCBP4P57723 403 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 TGM3Q08188 693 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 ABHD18Q0P651 414 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 IFT88Q13099 833 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 ZRSR2Q15696 482 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 CPSF6Q16630 551 aaKnown RBP eCLIP13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 TMEM35AQ53FP2 167 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 FRG2Q64ET8 278 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 LETMD1Q6P1Q0 360 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 RNF165Q6ZSG1 346 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 CHSY3Q70JA7 882 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 RPS27LQ71UM5 84 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 DTX1Q86Y01 620 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 DSELQ8IZU8 1212 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 NLGN4XQ8N0W4 816 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 ANKRD42Q8N9B4 389 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 NLGN4YQ8NFZ3 816 aaPredicted RBP13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 SNIP1Q8TAD8 396 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 ZNF473Q8WTR7 871 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 CLIP3Q96DZ5 547 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 CMTM7Q96FZ5 175 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 FRG2BQ96QU4 278 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 CENPKQ9BS16 269 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 ELOVL6Q9H5J4 265 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 SYNPO2LQ9H987 977 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 MID1IP1Q9NPA3 183 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 TXLNGQ9NUQ3 528 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 PADI1Q9ULC6 663 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 AHCTF1Q8WYP5 2266 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 A0A088AWK7 358 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 SERTM1A2A2V5 107 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 MEN1O00255 615 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 PPP6CO00743 305 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 KLF11O14901 512 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 P2RX6O15547 441 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 ULK1O75385 1050 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 NSA2O95478 260 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 NTRK1P04629 796 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 CAPNS1P04632 268 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 UROSP10746 265 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 LIPCP11150 499 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 HSD3B1P14060 373 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 ZNF28P17035 718 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 ZNF10P21506 573 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 AGXTP21549 392 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 PTX3P26022 381 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 HSD3B2P26439 372 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 TSFMP43897 325 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 ATP1A2P50993 1020 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 DCDP81605 110 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 HKDC1Q2TB90 917 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 ATG16L1Q676U5 607 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 TTC19Q6DKK2 380 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 TTLL10Q6ZVT0 673 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 SYVN1Q86TM6 617 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 AFAP1L2Q8N4X5 818 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 ARFGAP2Q8N6H7 521 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 ZNF248Q8NDW4 579 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 HUS1BQ8NHY5 278 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 METTL6Q8TCB7 284 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 GAL3ST3Q96A11 431 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 C10orf90Q96M02 699 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 GBP5Q96PP8 586 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 CDK15Q96Q40 435 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 PAIP2Q9BPZ3 127 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 DPH1Q9BZG8 443 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 ROGDIQ9GZN7 287 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 BRF2Q9HAW0 419 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 NMRK1Q9NWW6 199 aa13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-201ENST00000361439 C21orf140B9A014 251 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 H0YIG0 161 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 UBFD1O14562 309 aaKnown RBP13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 OR4F21O95013 312 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 SEMA3DO95025 777 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 ALBP02768 609 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 CAPN1P07384 714 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 CTSBP07858 339 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 SMIM10L1P0DMW3 83 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 PCNAP12004 261 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 NEFHP12036 1026 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 ALOX12P18054 663 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 TSPAN8P19075 237 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 NR1D1P20393 614 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 HMOX2P30519 316 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 AVPR1BP47901 424 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 HYAL2Q12891 473 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 CUL3Q13618 768 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 CHI3L2Q15782 390 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 ARL13AQ5H913 290 aaPredicted RBP13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 PRAMEF17Q5VTA0 474 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 ZNF385CQ66K41 422 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms