RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CADM1Q9BY67 442 aaKnown RBP13.27□□□□□ -0.29
PDLIM5-203ENST00000359265 TWSG1Q9GZX9 223 aa13.27□□□□□ -0.29
PDLIM5-203ENST00000359265 MMADHCQ9H3L0 296 aaPredicted RBP13.27□□□□□ -0.29
PDLIM5-203ENST00000359265 UCK1Q9HA47 277 aa13.27□□□□□ -0.29
PDLIM5-203ENST00000359265 ACTR10Q9NZ32 417 aa13.27□□□□□ -0.29
PDLIM5-203ENST00000359265 ANKMY1Q9P2S6 941 aa13.27□□□□□ -0.29
PDLIM5-203ENST00000359265 SLC6A14Q9UN76 642 aa13.27□□□□□ -0.29
PDLIM5-203ENST00000359265 SNX7Q9UNH6 387 aa13.27□□□□□ -0.29
PDLIM5-203ENST00000359265 CSNK1G3Q9Y6M4 447 aa13.27□□□□□ -0.29
PDLIM5-203ENST00000359265 ITPR1Q14643 2758 aa13.27□□□□□ -0.29
PDLIM5-203ENST00000359265 IGKV1-8A0A0C4DH67 115 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 OR6C74A6NCV1 312 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 ANKRD28O15084 1053 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 YY2O15391 372 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 OR1F1O43749 312 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 SDC3O75056 442 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 SEMA3DO95025 777 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 ETHE1O95571 254 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 CER1O95813 267 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 CD1EP15812 388 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 UGT2B7P16662 529 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 SDC1P18827 310 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 CAPN3P20807 821 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 PTX3P26022 381 aaPredicted RBP13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 TIA1P31483 386 aaKnown RBP eCLIP13.26□□□□□ -0.294e-7■■■■■ 27.1
PDLIM5-203ENST00000359265 CPOXP36551 454 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 PGM1P36871 562 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 CLNS1AP54105 237 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 MAZP56270 477 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 SLC25A3Q00325 362 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 SLC5A12Q1EHB4 618 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 KIAA1614Q5VZ46 1190 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 ZNF425Q6IV72 752 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 ARMC6Q6NXE6 501 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 NOXRED1Q6NXP6 359 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 SLC23A3Q6PIS1 610 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 HACD2Q6Y1H2 254 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 VN1R5Q7Z5H4 357 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 LURAP1LQ8IV03 231 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 SFTPA2Q8IWL1 248 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 PGAM4Q8N0Y7 254 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 C1orf52Q8N6N3 182 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 GLB1L3Q8NCI6 653 aaPredicted RBP13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 PROKR1Q8TCW9 393 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 CHTF18Q8WVB6 975 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 NPAS2Q99743 824 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 CENPKQ9BS16 269 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 SCNM1Q9BWG6 230 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 MS4A8Q9BY19 250 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 SIRT5Q9NXA8 310 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 AHSPQ9NZD4 102 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 MAPRE3Q9UPY8 281 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 DLGAP4Q9Y2H0 992 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 LAMA5O15230 3695 aa13.26□□□□□ -0.29
PDLIM5-203ENST00000359265 A0A1W2PP18 115 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 FEZF1A0PJY2 475 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 CCDC154A6NI56 674 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 LILRA5A6NI73 299 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 C9JVG2 144 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 FBP2O00757 339 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 CFLARO15519 480 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 ZW10O43264 779 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 NOBOXO60393 691 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 PRMT3O60678 531 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 CLEC3AO75596 197 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 TGFB1P01137 390 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 POLR2CP19387 275 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 AHRP35869 848 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 MPLP40238 635 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 ASMTP46597 345 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 CLDN8P56748 225 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 CYP4F2P78329 520 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 TBL3Q12788 808 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 PTGR1Q14914 329 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 DEFB133Q30KQ1 61 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 C14orf28Q4W4Y0 310 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 TRIM61Q5EBN2 209 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 KLHL35Q6PF15 583 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 DEFB107AQ8IZN7 70 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 DSELQ8IZU8 1212 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 METTL4Q8N3J2 472 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 ARL14Q8N4G2 192 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 GPR156Q8NFN8 814 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 FLVCR1-AS1Q8TAF5 88 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 STARD8Q92502 1023 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 TEX37Q96LM6 180 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 TSSK3Q96PN8 268 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 OR2A14Q96R47 310 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 EBPLQ9BY08 206 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 OR51B5Q9H339 312 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 ACTL8Q9H568 366 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 WDR41Q9HAD4 459 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 CAPN10Q9HC96 672 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 LEF1Q9UJU2 399 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 PRPF19Q9UMS4 504 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 PCDH15Q96QU1 1955 aa13.25□□□□□ -0.29
PDLIM5-203ENST00000359265 KNL1Q8NG31 2342 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 IGSF10Q6WRI0 2623 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms