RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 MINDY3Q9H8M7 445 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 PCDHGA2Q9Y5H1 932 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 A0A0B4J203 849 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 A0A1W2PPL8 197 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 F8W036 122 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 SLC2A3P11169 496 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 ICAM3P32942 547 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 IDH2P48735 452 aaKnown RBP12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 BLVRAP53004 296 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 PTGR1Q14914 329 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 ZNF169Q14929 603 aaPredicted RBP12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 FCN2Q15485 313 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 DUSP6Q16828 381 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 TTLL9Q3SXZ7 439 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 PAN2Q504Q3 1202 aaKnown RBP12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 PLAG1Q6DJT9 500 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 FIP1L1Q6UN15 594 aaKnown RBP12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 LIMS2Q7Z4I7 341 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 COPS5Q92905 334 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 FUBP1Q96AE4 644 aaKnown RBP12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 PHF21AQ96BD5 680 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 PPP1R3EQ9H7J1 279 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 ATP13A1Q9HD20 1204 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 LIPT1Q9Y234 373 aa12.85□□□□□ -0.35
SPTSSB-201ENST00000359175 SCN1AP35498 2009 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 SH3D21A4FU49 640 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 E2F3O00716 465 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 MATN3O15232 486 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 CDRT1O95170 752 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 LDOC1O95751 146 aaPredicted RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 IQCF3P0C7M6 154 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 HTR6P50406 440 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 ARSDP51689 593 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 TSNQ15631 228 aaKnown RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 MICAQ29983 383 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 FAM160B1Q5W0V3 765 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 TMEM145Q8NBT3 493 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 SRFBP1Q8NEF9 429 aaKnown RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 YIPF5Q969M3 257 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 CLMPQ9H6B4 373 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 OR12D3Q9UGF7 316 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 NCKAP1Q9Y2A7 1128 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 LSM2Q9Y333 95 aaKnown RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 MAB21L2Q9Y586 359 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 LCHNA4D1U4 455 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 MFSD2BA6NFX1 497 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 KRBOX1C9JBD0 128 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 NUPL2O15504 423 aaKnown RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 HCRTO43612 131 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 HLA-DQB2P05538 268 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 APEX1P27695 318 aaKnown RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 HLA-FP30511 346 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 LTB4RQ15722 352 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 GPR68Q15743 365 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 RGMBQ6NW40 437 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 METTL6Q8TCB7 284 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 FAM151AQ8WW52 585 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 UCN3Q969E3 161 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 ZNF668Q96K58 619 aaPredicted RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 PPP3R2Q96LZ3 170 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 SERPINB11Q96P15 392 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 OR52E6Q96RD3 313 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 NPAS1Q99742 590 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 TMEM43Q9BTV4 400 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 KATNAL1Q9BW62 490 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 DPY30Q9C005 99 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 MED28Q9H204 178 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 KCNH6Q9H252 994 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 SYNDIG1Q9H7V2 258 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 SLC28A3Q9HAS3 691 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 HPF1Q9NWY4 346 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 ADAM30Q9UKF2 790 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 SSR3Q9UNL2 185 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 A0A0A6YYJ9 748 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 LOC102723532A0A0G2JNH3 316 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 SLC22A23A1A5C7 686 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 OR51F1A6NGY5 319 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 HLA-EP13747 358 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 CD9P21926 228 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 CLCN4P51793 760 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 WNT3AP56704 352 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 HNRNPA0Q13151 305 aaKnown RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 LGALSLQ3ZCW2 172 aaPredicted RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 IQCCQ4KMZ1 466 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 ZNF648Q5T619 568 aaPredicted RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 METAP1DQ6UB28 335 aaPredicted RBP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 VTCN1Q7Z7D3 282 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 ADGRD2Q7Z7M1 963 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 CDH26Q8IXH8 852 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 FAM217AQ8IXS0 508 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 TMEM132CQ8N3T6 1108 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 LIX1Q8N485 282 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 ATPAF2Q8N5M1 289 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 OR52B6Q8NGF0 335 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 MTERF3Q96E29 417 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 RADILQ96JH8 1075 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 ZCCHC4Q9H5U6 513 aa12.84□□□□□ -0.35
SPTSSB-201ENST00000359175 ANKRA2Q9H9E1 313 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms