RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 MST1RQ04912 1400 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 TREHO43280 583 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 WDPCPO95876 746 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 CD3GP09693 182 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 IDO1P14902 403 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 NPBWR1P48145 328 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 RHDQ02161 417 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 HAS1Q92839 578 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 TMEM74Q96NL1 305 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 NEDD4LQ96PU5 975 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 SNRNP25Q9BV90 132 aaKnown RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 TMEM185BQ9H7F4 350 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 DNAJC18Q9H819 358 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 IPPKQ9H8X2 491 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 NINJ2Q9NZG7 142 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 DISC1C4P0D8 188 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 RPP40O75818 363 aaKnown RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 AHSA1O95433 338 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 KLK1P06870 262 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 H2BFMP0C1H6 154 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 PFKLP17858 780 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 GRIA1P42261 906 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 KIR3DL1P43629 444 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 P2RX1P51575 399 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 DSC2Q02487 901 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 IRF5Q13568 498 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 EEF1DP3Q658K8 133 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 OR6N2Q8NGY6 317 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 GTF2H4Q92759 462 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 ZDHHC12Q96GR4 267 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 OR2M4Q96R27 311 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 PCDHB18PQ96TA0 734 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 ACO2Q99798 780 aaKnown RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 TLR10Q9BXR5 811 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 XKR8Q9H6D3 395 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 UTS2RQ9UKP6 389 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 A0A0A0MRY4 1105 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 ZNF860A6NHJ4 632 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 SYN3O14994 580 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 CSKP41240 450 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 PDK3Q15120 406 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 CCDC58Q4VC31 144 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 CFAP77Q6ZQR2 320 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 PIGZQ86VD9 579 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 H1FXQ92522 213 aaKnown RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 SPATA13Q96N96 652 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 FAM83CQ9BQN1 747 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 GPR174Q9BXC1 333 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 ZNF705FA8MVS1 300 aaPredicted RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 MMP20O60882 483 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 AOC2O75106 756 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 ZNF705DP0CH99 300 aaPredicted RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 ZNF705BP0CI00 300 aaPredicted RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 CYP2C18P33260 490 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 RPL7AP62424 266 aaKnown RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 HEPACAMQ14CZ8 416 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 ADGRD1Q6QNK2 874 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 FAM92BQ6ZTR7 304 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 KLHL36Q8N4N3 616 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 GTF2IRD1Q9UHL9 959 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 A0A1W2PPK0 400 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 ZNF780AO75290 641 aaPredicted RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 ZNF14P17017 642 aaPredicted RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 APLNRP35414 380 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 TYSND1Q2T9J0 566 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 GIMAP5Q96F15 307 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 HMCESQ96FZ2 354 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 TXN2Q99757 166 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 HERC2P3Q9BVR0 1158 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 RGCCQ9H4X1 137 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 PDE7BQ9NP56 450 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 TAC3Q9UHF0 121 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 MAN2B2Q9Y2E5 1009 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 PCDHB14Q9Y5E9 798 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 HTR1AP08908 422 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 TIMP2P16035 220 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 TACR2P21452 398 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 LSSP48449 732 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 DGKQP52824 942 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 FXYD4P59646 89 aa9.48□□□□□ -0.89
CHD3-202ENST00000358181 UBE2J1Q9Y385 318 aaPredicted RBP9.48□□□□□ -0.89
CHD3-202ENST00000358181 GLOD5A6NK44 160 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 RHOP08100 348 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 ANXA3P12429 323 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 RFC2P35250 354 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 CRYBB1P53674 252 aaPredicted RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 ZNF267Q14586 743 aaPredicted RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 GLYATQ6IB77 296 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 TTC27Q6P3X3 843 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 CLEC17AQ6ZS10 378 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 HMGN2P46Q86SG4 172 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 FUKQ8N0W3 1084 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 SH3RF2Q8TEC5 729 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 FGFBP2Q9BYJ0 223 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 DEFB126Q9BYW3 111 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 POP4O95707 220 aaKnown RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 UGT8Q16880 541 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 ELP5Q8TE02 316 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 DECR2Q9NUI1 292 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 OXSMQ9NWU1 459 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms