RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 NUF2Q9BZD4 464 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 ACPTQ9BZG2 426 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 STRADBQ9C0K7 418 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 GIMAP2Q9UG22 337 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 ADAM21Q9UKJ8 722 aa24.2■■□□□ 1.47
SSBP3-202ENST00000357475 CLEC3AO75596 197 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 B3GALT4O96024 378 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 PIK3CBP42338 1070 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 PRTGQ2VWP7 1150 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 RAB11FIP2Q7L804 512 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 TMPRSS12Q86WS5 348 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 TTLQ8NG68 377 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 CMKLR1Q99788 373 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 SLC6A16Q9GZN6 736 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 IRAK4Q9NWZ3 460 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 CCL27Q9Y4X3 112 aa24.2■■□□□ 1.46
SSBP3-202ENST00000357475 KNTC1P50748 2209 aa24.19■■□□□ 1.46
SSBP3-202ENST00000357475 ATP6AP2A0A1C7CYW4 349 aa24.19■■□□□ 1.46
SSBP3-202ENST00000357475 FOXE1O00358 373 aaPredicted RBP24.19■■□□□ 1.46
SSBP3-202ENST00000357475 SRPX2O60687 465 aaPredicted RBP24.19■■□□□ 1.46
SSBP3-202ENST00000357475 ATP6AP2O75787 350 aa24.19■■□□□ 1.46
SSBP3-202ENST00000357475 ACY1Q03154 408 aa24.19■■□□□ 1.46
SSBP3-202ENST00000357475 TOR1AIP1Q5JTV8 583 aa24.19■■□□□ 1.46
SSBP3-202ENST00000357475 ARHGEF39Q8N4T4 335 aa24.19■■□□□ 1.46
SSBP3-202ENST00000357475 ZNF655Q8N720 491 aaPredicted RBP24.19■■□□□ 1.46
SSBP3-202ENST00000357475 TRPV3Q8NET8 790 aa24.19■■□□□ 1.46
SSBP3-202ENST00000357475 RFWD2Q8NHY2 731 aa24.19■■□□□ 1.46
SSBP3-202ENST00000357475 NT5CQ8TCD5 201 aa24.19■■□□□ 1.46
SSBP3-202ENST00000357475 SPTBN4Q9H254 2564 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 LRIT2A6NDA9 550 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 OR2B3O76000 313 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 MC2RQ01718 297 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 C3orf38Q5JPI3 329 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 FOXR1Q6PIV2 292 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 Q6ZSR9 355 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 TRIM46Q7Z4K8 759 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 ZCCHC10Q8TBK6 192 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 C19orf60Q96EN9 201 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 CHMP6Q96FZ7 201 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 RABEP2Q9H5N1 569 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 NPHS2Q9NP85 383 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 SLC12A4Q9UP95 1085 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 SATB2Q9UPW6 733 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 USH1CQ9Y6N9 552 aa24.18■■□□□ 1.46
SSBP3-202ENST00000357475 A0A0G2JN53 185 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 TMX2-CTNND1H3BSU7 103 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 HDAC3O15379 428 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 CHEK2O96017 543 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 SERPINA6P08185 405 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 SLC35G6P0C7Q6 338 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 ITGA1P56199 1179 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 PWP1Q13610 501 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 XKR7Q5GH72 579 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 TMPRSS7Q7RTY8 843 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 UBE3DQ7Z6J8 389 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 CAMKVQ8NCB2 501 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 MS4A6EQ96DS6 147 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 C10orf90Q96M02 699 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 SORBS1Q9BX66 1292 aaKnown RBP24.17■■□□□ 1.46
SSBP3-202ENST00000357475 PISDQ9UG56 409 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 FER1L5A0AVI2 2057 aa24.17■■□□□ 1.46
SSBP3-202ENST00000357475 CCDC187A0A096LP49 1063 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 GSTM2P28161 218 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 ADPRMQ3LIE5 342 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 SLC9B1Q4ZJI4 515 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 KHDRBS2Q5VWX1 349 aaKnown RBP24.16■■□□□ 1.46
SSBP3-202ENST00000357475 PWWP2BQ6NUJ5 590 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 TMEM214Q6NUQ4 689 aaKnown RBP24.16■■□□□ 1.46
SSBP3-202ENST00000357475 PRSS41Q7RTY9 318 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 CMTM7Q96FZ5 175 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 SEC16BQ96JE7 1060 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 WDR55Q9H6Y2 383 aaPredicted RBP24.16■■□□□ 1.46
SSBP3-202ENST00000357475 BRF2Q9HAW0 419 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 FANCEQ9HB96 536 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 ADGRE2Q9UHX3 823 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 RARRES3Q9UL19 164 aa24.16■■□□□ 1.46
SSBP3-202ENST00000357475 SERTM1A2A2V5 107 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 FITM1A5D6W6 292 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 RTCAO00442 366 aaKnown RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 SDHDO14521 159 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 ZNF888P0CJ79 500 aaPredicted RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 SERPINB1P30740 379 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 MAPK10P53779 464 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 RAB8AP61006 207 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 PHEXP78562 749 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 RGS1Q08116 209 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 CSTF3Q12996 717 aaKnown RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 TCTE1Q5JU00 501 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 DEPDC1Q5TB30 811 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 RNF165Q6ZSG1 346 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 SHISA5Q8N114 240 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 FAR2Q96K12 515 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 MRPL1Q9BYD6 325 aaKnown RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 REXO4Q9GZR2 422 aaKnown RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 LHX9Q9NQ69 397 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 FBXO8Q9NRD0 319 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 SLC39A1Q9NY26 324 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 AKAP7Q9P0M2 348 aaPredicted RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 SERTAD3Q9UJW9 196 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 GOLGA8QA0A0J9YX86 632 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms