RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 ZNF548Q8NEK5 533 aaPredicted RBP16.91■□□□□ 0.3
NPAS3-202ENST00000356141 FBXL20Q96IG2 436 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 SGPP1Q9BX95 441 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 TRIT1Q9H3H1 467 aaKnown RBP16.91■□□□□ 0.3
NPAS3-202ENST00000356141 RUVBL1Q9Y265 456 aaKnown RBP16.91■□□□□ 0.3
NPAS3-202ENST00000356141 CLIC1O00299 241 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 PRAMEF10O60809 474 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 C6orf47O95873 294 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 IL3P08700 152 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 HIST2H2ACQ16777 129 aaPredicted RBP16.91■□□□□ 0.3
NPAS3-202ENST00000356141 HIST2H2AA3Q6FI13 130 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 VTCN1Q7Z7D3 282 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 TSPEARQ8WU66 669 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 PRPF18Q99633 342 aaKnown RBP16.91■□□□□ 0.3
NPAS3-202ENST00000356141 C1QTNF2Q9BXJ5 285 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 OCEL1Q9H607 264 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 KAT8Q9H7Z6 458 aaKnown RBP16.91■□□□□ 0.3
NPAS3-202ENST00000356141 SPTBP11277 2137 aa16.91■□□□□ 0.3
NPAS3-202ENST00000356141 C17orf113A0A1B0GUU1 675 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 hCG_2039718K7EN88 272 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 ANXA6P08133 673 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 MAPK1P28482 360 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 TNFRSF4P43489 277 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 C1orf61Q13536 156 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 ENPP2Q13822 863 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 OR4A15Q8NGL6 344 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 DOK4Q8TEW6 326 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 NELL1Q92832 810 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 LINC00615Q96LM1 132 aaPredicted RBP16.9■□□□□ 0.3
NPAS3-202ENST00000356141 SYNPO2LQ9H987 977 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 ANKDD1BA6NHY2 528 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 CACNB4O00305 520 aaPredicted RBP16.9■□□□□ 0.3
NPAS3-202ENST00000356141 CELA2BP08218 269 aaPredicted RBP16.9■□□□□ 0.3
NPAS3-202ENST00000356141 GGT1P19440 569 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 PTPN6P29350 595 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 TIA1P31483 386 aaKnown RBP eCLIP16.9■□□□□ 0.3
NPAS3-202ENST00000356141 TRIM23P36406 574 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 ACTR1BP42025 376 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 ACTR1AP61163 376 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 CSTF3Q12996 717 aaKnown RBP16.9■□□□□ 0.3
NPAS3-202ENST00000356141 PLCL1Q15111 1095 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 TMEM259Q4ZIN3 620 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 COX20Q5RI15 118 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 GLB1L3Q8NCI6 653 aaPredicted RBP16.9■□□□□ 0.3
NPAS3-202ENST00000356141 ADCY4Q8NFM4 1077 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 OR52E1Q8NGJ3 308 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 OR10G6Q8NH81 332 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 ZFAND2BQ8WV99 257 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 RNF31Q96EP0 1072 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 TPD52L3Q96J77 140 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 C6orf106Q9H6K1 298 aaPredicted RBP16.9■□□□□ 0.3
NPAS3-202ENST00000356141 RMND5AQ9H871 391 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 MAP4K5Q9Y4K4 846 aa16.9■□□□□ 0.3
NPAS3-202ENST00000356141 GNGT2O14610 69 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 METTL2BQ6P1Q9 378 aaKnown RBP16.89■□□□□ 0.29
NPAS3-202ENST00000356141 TICAM1Q8IUC6 712 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 FBXL6Q8N531 539 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 TRPV3Q8NET8 790 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 ZUFSPQ96AP4 578 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 CAMK1GQ96NX5 476 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 HHIPQ96QV1 700 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 C17orf62Q9BQA9 187 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 CPPED1Q9BRF8 314 aaPredicted RBP16.89■□□□□ 0.29
NPAS3-202ENST00000356141 PREBQ9HCU5 417 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 ITM2CQ9NQX7 267 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 GALNT8Q9NY28 637 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 AQP12BA6NM10 295 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 AGRPO00253 132 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 SCAMP2O15127 329 aaKnown RBP16.89■□□□□ 0.29
NPAS3-202ENST00000356141 PI15O43692 258 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 PRPS1L1P21108 318 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 HTR1EP28566 365 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 CRATP43155 626 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 YAP1P46937 504 aaKnown RBP16.89■□□□□ 0.29
NPAS3-202ENST00000356141 SNRPNP63162 240 aaKnown RBP16.89■□□□□ 0.29
NPAS3-202ENST00000356141 AQP12AQ8IXF9 295 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 CHTF18Q8WVB6 975 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 KLHL31Q9H511 634 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 SMURF2Q9HAU4 748 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 AGPAT4Q9NRZ5 378 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 EBF1Q9UH73 591 aa16.89■□□□□ 0.29
NPAS3-202ENST00000356141 A0A1W2PPV9 198 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 PRSS38A1L453 326 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 MAGEA13PA6NCF6 341 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 ISM1B1AKI9 464 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 TBX6O95947 436 aaPredicted RBP16.88■□□□□ 0.29
NPAS3-202ENST00000356141 CDH15P55291 814 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 HBA1P69905 142 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 CTBSQ01459 385 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 VAC14Q08AM6 782 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 ATG9BQ674R7 924 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 Q7L0L9 218 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 OLIG3Q7RTU3 272 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 STK32CQ86UX6 486 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 BTBD1Q9H0C5 482 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 KCNH6Q9H252 994 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 RHBDL2Q9NX52 303 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 RABL2AQ9UBK7 228 aaPredicted RBP16.88■□□□□ 0.29
NPAS3-202ENST00000356141 PCDHB3Q9Y5E6 796 aa16.88■□□□□ 0.29
NPAS3-202ENST00000356141 ABCA7Q8IZY2 2146 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms