RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 SH3KBP1Q96B97 665 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 PYCR2Q96C36 320 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 VPS35Q96QK1 796 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 ALOXE3Q9BYJ1 711 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 NDUFAF4Q9P032 175 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 B4GALT6Q9UBX8 382 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 SLC25A13Q9UJS0 675 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 KLK4Q9Y5K2 254 aa12.48□□□□□ -0.41
RNF220-202ENST00000355387 PCNTO95613 3336 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 SH3D21A4FU49 640 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 AGAP5A6NIR3 686 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 M0R082 166 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 MPZL2O60487 215 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 TNFRSF21O75509 655 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 SNX4O95219 450 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 LCKP06239 509 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 VIPR1P32241 457 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 HMGA2P52926 109 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 PPIGQ13427 754 aaKnown RBP eCLIP12.47□□□□□ -0.413e-7■■■□□ 16.4
RNF220-202ENST00000355387 DGCR6Q14129 220 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 DMC1Q14565 340 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 PERM1Q5SV97 790 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 TMEM236Q5W0B7 351 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 TXNDC8Q6A555 127 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 PNCKQ6P2M8 343 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 TSEN54Q7Z6J9 526 aaKnown RBP12.47□□□□□ -0.41
RNF220-202ENST00000355387 SLC39A11Q8N1S5 342 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 MRPS31Q92665 395 aaKnown RBP12.47□□□□□ -0.41
RNF220-202ENST00000355387 MTERF3Q96E29 417 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 TSC22D4Q9Y3Q8 395 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 PCDHGA3Q9Y5H0 932 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 LTBP2Q14767 1821 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 ARHGEF33A8MVX0 844 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 TNFRSF11BO00300 401 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 FOXE1O00358 373 aaPredicted RBP12.47□□□□□ -0.41
RNF220-202ENST00000355387 DIRAS1O95057 198 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 PTTG1O95997 202 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 IFNA14P01570 189 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 CATP04040 527 aaKnown RBP12.47□□□□□ -0.41
RNF220-202ENST00000355387 RPLP0P05388 317 aaKnown RBP12.47□□□□□ -0.41
RNF220-202ENST00000355387 LIPAP38571 399 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 CLK1P49759 484 aaKnown RBP12.47□□□□□ -0.41
RNF220-202ENST00000355387 MVDP53602 400 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.47□□□□□ -0.41
RNF220-202ENST00000355387 PDE7AQ13946 482 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 MICAQ29983 383 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 AGTRAPQ6RW13 159 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 PAGE2Q7Z2X7 111 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 BBS7Q8IWZ6 715 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 OR52N2Q8NGI0 321 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.47□□□□□ -0.412e-7■■■■■ 31.9
RNF220-202ENST00000355387 SKA2Q8WVK7 121 aaPredicted RBP12.47□□□□□ -0.41
RNF220-202ENST00000355387 TXNDC15Q96J42 360 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 ZSCAN5AQ9BUG6 496 aa12.47□□□□□ -0.41
RNF220-202ENST00000355387 CNOT2Q9NZN8 540 aaKnown RBP12.47□□□□□ -0.41
RNF220-202ENST00000355387 STOX2Q9P2F5 926 aaPredicted RBP12.47□□□□□ -0.41
RNF220-202ENST00000355387 E7EQ34 232 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 MAN1A2O60476 641 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 GCM2O75603 506 aaPredicted RBP12.46□□□□□ -0.41
RNF220-202ENST00000355387 RB1P06400 928 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 LIMS1P48059 325 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 ALDH9A1P49189 494 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 EIF2B2P49770 351 aaKnown RBP12.46□□□□□ -0.41
RNF220-202ENST00000355387 TIGD6Q17RP2 521 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 CRB2Q5IJ48 1285 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 DEPDC1Q5TB30 811 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 C19orf48Q6RUI8 117 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 ZNF367Q7RTV3 350 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 OXR1Q8N573 874 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 NAT16Q8N8M0 369 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 OR10G2Q8NGC3 310 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 HCAR2Q8TDS4 363 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 DPH2Q9BQC3 489 aaPredicted RBP12.46□□□□□ -0.41
RNF220-202ENST00000355387 RHNO1Q9BSD3 238 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 RACGAP1Q9H0H5 632 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 FAM83DQ9H4H8 585 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 EHD1Q9H4M9 534 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 RUBCNLQ9H714 662 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 SGK2Q9HBY8 427 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.46□□□□□ -0.41
RNF220-202ENST00000355387 CFAP97Q9P2B7 532 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 CLEC4EQ9ULY5 219 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 BTBD3Q9Y2F9 522 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 AOC2O75106 756 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 ANXA4P09525 319 aaPredicted RBP12.46□□□□□ -0.41
RNF220-202ENST00000355387 GAB1Q13480 694 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 ZNF630Q2M218 657 aaPredicted RBP12.46□□□□□ -0.41
RNF220-202ENST00000355387 INAVAQ3KP66 663 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.46□□□□□ -0.41
RNF220-202ENST00000355387 GDPD4Q6W3E5 623 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 FAM92BQ6ZTR7 304 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 LYSMD2Q8IV50 215 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 SLC22A15Q8IZD6 547 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 GALNT6Q8NCL4 622 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 GGHQ92820 318 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 TPD52L3Q96J77 140 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 MAPKAP1Q9BPZ7 522 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 HEPHQ9BQS7 1158 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 ATG10Q9H0Y0 220 aa12.46□□□□□ -0.41
RNF220-202ENST00000355387 EPHX3Q9H6B9 360 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms