RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 MAD2L1BPQ15013 274 aaPredicted RBP21.28■■□□□ 1
UPF3A-201ENST00000351487 DOHHQ9BU89 302 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 TBCCD1Q9NVR7 557 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 SCN3BQ9NY72 215 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 SH3BP4Q9P0V3 963 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 INSL6Q9Y581 213 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 PCDHGA10Q9Y5H3 936 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 KPNA3O00505 521 aaPredicted RBP21.28■■□□□ 1
UPF3A-201ENST00000351487 GABARAPO95166 117 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 CYP17A1P05093 508 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 CD6P30203 668 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 RXRGP48443 463 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 C21orf59P57076 290 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 PDE7AQ13946 482 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 SPCS2Q15005 226 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 PAGE2BQ5JRK9 111 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 CATSPEREQ5SY80 951 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.28■■□□□ 1
UPF3A-201ENST00000351487 ZNF765Q7L2R6 523 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 ATG16L2Q8NAA4 619 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 PPP1R14BQ96C90 147 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 PLEKHA8Q96JA3 519 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 CCNB1IP1Q9NPC3 277 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 DMRT3Q9NQL9 472 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 ERVK-18Q9QC07 812 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 SH2B3Q9UQQ2 575 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 DYRK1BQ9Y463 629 aa21.28■■□□□ 1
UPF3A-201ENST00000351487 NUP210Q8TEM1 1887 aaPredicted RBP21.28■■□□□ 1
UPF3A-201ENST00000351487 TCF20Q9UGU0 1960 aaKnown RBP21.27■■□□□ 1
UPF3A-201ENST00000351487 XYLBO75191 536 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 GCM2O75603 506 aaPredicted RBP21.27■■□□□ 1
UPF3A-201ENST00000351487 PRNPP04156 253 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 C1GALT1C1LP0DN25 315 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 RANBP1P43487 201 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 RAB15P59190 212 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 SLBPQ14493 270 aaKnown RBP eCLIP21.27■■□□□ 1
UPF3A-201ENST00000351487 ARMCX6Q7L4S7 300 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 COMMD6Q7Z4G1 85 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 NAGSQ8N159 534 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 SMYD1Q8NB12 490 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 TRUB1Q8WWH5 349 aaKnown RBP21.27■■□□□ 1
UPF3A-201ENST00000351487 MAL2Q969L2 176 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 GABARAPL3Q9BY60 117 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 ITM2CQ9NQX7 267 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 ATAD3AQ9NVI7 634 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 FAIMQ9NVQ4 179 aa21.27■■□□□ 1
UPF3A-201ENST00000351487 PIPSLA2A3N6 862 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 ZBBXA8MT70 800 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 EPHA2P29317 976 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 IRS1P35568 1242 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 MLLT10P55197 1068 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 ST8SIA6P61647 398 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 CAMK2GQ13555 558 aaPredicted RBP21.27■□□□□ 0.99
UPF3A-201ENST00000351487 NPTX1Q15818 432 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 PROX2Q3B8N5 592 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 LRRC56Q8IYG6 542 aaPredicted RBP21.27■□□□□ 0.99
UPF3A-201ENST00000351487 CFAP206Q8IYR0 622 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 OR9A1PQ8NGU1 263 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 RORBQ92753 470 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 IL23AQ9NPF7 189 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 GPATCH2Q9NW75 528 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 SLC27A6Q9Y2P4 619 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 PCDHGB3Q9Y5G1 929 aa21.27■□□□□ 0.99
UPF3A-201ENST00000351487 KIF26AQ9ULI4 1882 aaPredicted RBP21.26■□□□□ 0.99
UPF3A-201ENST00000351487 MUC22E2RYF6 1773 aaPredicted RBP21.26■□□□□ 0.99
UPF3A-201ENST00000351487 HOXC11O43248 304 aaPredicted RBP21.26■□□□□ 0.99
UPF3A-201ENST00000351487 NTRK1P04629 796 aa21.26■□□□□ 0.99
UPF3A-201ENST00000351487 HNRNPA1P09651 372 aaKnown RBP eCLIP21.26■□□□□ 0.99
UPF3A-201ENST00000351487 ADH5P11766 374 aa21.26■□□□□ 0.99
UPF3A-201ENST00000351487 HBA1P69905 142 aa21.26■□□□□ 0.99
UPF3A-201ENST00000351487 NPRL3Q12980 569 aa21.26■□□□□ 0.99
UPF3A-201ENST00000351487 C12orf40Q86WS4 652 aa21.26■□□□□ 0.99
UPF3A-201ENST00000351487 CCDC71Q8IV32 467 aaPredicted RBP21.26■□□□□ 0.99
UPF3A-201ENST00000351487 LINC00615Q96LM1 132 aaPredicted RBP21.26■□□□□ 0.99
UPF3A-201ENST00000351487 COQ6Q9Y2Z9 468 aa21.26■□□□□ 0.99
UPF3A-201ENST00000351487 MAGEB3O15480 346 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 TNFRSF21O75509 655 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 FURINP09958 794 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 ITGB7P26010 798 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 RPL3P39023 403 aaKnown RBP21.25■□□□□ 0.99
UPF3A-201ENST00000351487 SELENOWP63302 87 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 MVKQ03426 396 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 FCHO2Q0JRZ9 810 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 ELOAQ14241 798 aaKnown RBP21.25■□□□□ 0.99
UPF3A-201ENST00000351487 SYT6Q5T7P8 510 aaPredicted RBP21.25■□□□□ 0.99
UPF3A-201ENST00000351487 TSEN54Q7Z6J9 526 aaKnown RBP21.25■□□□□ 0.99
UPF3A-201ENST00000351487 TRIM74Q86UV6 250 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 FAM124AQ86V42 546 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 TRAPPC5Q8IUR0 188 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 NUS1Q96E22 293 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 MYOCQ99972 504 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 OR2AG1Q9H205 316 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 MYNNQ9NPC7 610 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 AASSQ9UDR5 926 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 ZNF12P17014 697 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 CEBPBP17676 345 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 AQP1P29972 269 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 METAP1P53582 386 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 TAP2Q03519 686 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 RBBP4Q09028 425 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms